Streptomyces subrutilus: CP968_07225
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Entry
CP968_07225 CDS
T07087
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ssub
Streptomyces subrutilus
Pathway
ssub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP968_07225 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssub03400
]
CP968_07225 (xth)
Enzymes [BR:
ssub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CP968_07225 (xth)
DNA repair and recombination proteins [BR:
ssub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CP968_07225 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
GNAT_like
Motif
Other DBs
NCBI-ProteinID:
QEU78102
UniProt:
A0A5P2UFT3
LinkDB
All DBs
Position
complement(1646660..1647445)
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AA seq
261 aa
AA seq
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MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCSAEQFPHDELRELGYESAVNATG
RWNGVALLSKVGLEDVVTGLPGGPDYEGVQEPRAISATCGGVRVWSVYVPNGREVEHDHY
GYKLGWFRALAAAVAEDAAGPRPFAVLGDFNVAPTDEDVYDPAVFAGATHVTPAERAALE
ELRAAGLSDVFPRALKYDRPYTFWDYRMLAFPKNRGMRIDLVYGNEPFTKAVTDAYVDRE
ERKGKGASDHAPVVVDLDLDR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgccacgtacaacgtcaactcgatcacggcccggctgccgcgcctgctcgcc
tggctggagagctccggcacggacgtcctgtgcgtccaggagaccaagtgctccgcggag
cagttcccccacgacgagctgcgcgagctcggctacgagtcggccgtcaacgccaccggc
cggtggaacggcgtcgcccttctctccaaggtcggcctggaggacgtggtcaccggtctg
ccgggcgggcccgactacgagggcgtccaggagccccgcgcgatctccgcgacctgcggc
ggggtccgcgtctggtcggtgtacgtgcccaacggccgcgaggtggagcacgaccactac
ggctacaagctgggctggttccgcgccctggccgccgccgtggccgaggacgcggccggt
ccgcgccccttcgcggtcctcggcgacttcaacgtggccccgaccgacgaggacgtctac
gacccggccgtcttcgccggcgccacccacgtgacccccgccgagcgcgcggccctggag
gagctgcgggccgcgggcctctccgacgtgttcccccgcgccctcaagtacgaccgcccg
tacaccttctgggactaccgcatgctcgccttcccgaagaaccggggcatgcgcatcgac
ctggtctacgggaacgagcccttcaccaaggccgtcaccgacgcctacgtggaccgcgag
gagcgcaagggcaagggcgcgtccgaccacgcaccggtcgtggtggacctcgacctcgac
cggtag
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