Streptomyces subrutilus: CP968_11915
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Entry
CP968_11915 CDS
T07087
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssub
Streptomyces subrutilus
Pathway
ssub03420
Nucleotide excision repair
ssub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP968_11915
03430 Mismatch repair
CP968_11915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssub03400
]
CP968_11915
Enzymes [BR:
ssub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP968_11915
DNA repair and recombination proteins [BR:
ssub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP968_11915
MMR (mismatch excision repair)
Other MMR factors
CP968_11915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEU78905
UniProt:
A0A5P2UKN6
LinkDB
All DBs
Position
complement(2782733..2786452)
Genome browser
AA seq
1239 aa
AA seq
DB search
MSARPSVLTDPEQLKELLGIPFTPEQLACVTAPPAPQVIVAGAGSGKTTVMAARVVWLVG
TGVVAPEQVLGLTFTNKAAGELAERVRKALARAGITDPDPSPADAATAGGEPRIATYHAF
AGQLLKDHGLRIGLEPSARLLADATRFQLAAKVLREAPGPYPSLTKSVPDLVGDLLALDA
ELSEHLVPPDRLRAWDTALLDTLAGTRLTNEDLRKVPEAVRGRLELLELVARYRTAKRSR
DLFDFSDQIALSAQLATTRPEVGALLREEFRVVLLDEYQDTSVAQRLLLSGLFGAGSGHA
VTAVGDPCQAIYGWRGASVANLDDFPAHFPHADGSPATRFSLSENRRSGGRLLDLANGLA
APLRALHEGVEALRPAPGAERDGLVRCALLPTHAEELDWLADSVAHLVRTGTEPREIAVL
CRSAGDFARIQAVLVDRDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLIG
PRWRIGARDLALLGRRARLLVGRAPGGGGTDADERLAAAVEGVDPAEVVSLADALETFLD
GAGATPDDLPFSAEARVRFAHLAQELRDLRRSLADPLMDVLHRVLTATGLEVELSASPHA
LAARRRETLSNFMDVAAGFAALDGQASLLAFLAFLRTAAQYEKGLDHALPGGENTVKVLT
AHKSKGLEWDVVVVPDLCAGSFPKEKPPEAWTSYAKVLPYALRGDAPTLPGDPAWTSAGL
KSFKAALKDHKAVEELRLGYVTFTRPRSLLLASGHWWGPSQKKRRGPSAFLTALYGHCAA
GYGEIEAWAPEPDADAENPALSAVSEADRSWPLPLDPDSLRRRRAAAALVEAHLAAPPPA
PEDPDGYLWPPHCEDPAHEDEPRPPETTPPTPALPHPRTTRAEPPADDPWAEDPWADEPA
PGRGRTTTATPAEAASDDDDPWAGEPWAEGPGASDAALPHPRTTTGTGTGTGTEPSADAP
RADDPWVDDPWAAEPWAAGPWAVPGPGGRGAGEGGAAGGLSAEEARAVASWDRDLDALEG
ELRRARAAVRDVELPAALSASQLLRLAADEQRFARDLARPMPQPPQPAARQGTRFHAWVE
SRFDELPLPMLDVLDPATELPGSDQDIADEADLASLKAAFERSPYADRPPHRMEAPVQVT
LAGRVVRGRIDAVYRDPDGSYEIVDWKTGRTTEADPLQLAVYRLAWAEATGTPLDRVAAV
FLHVRSGRVIRPRDLPDRAGLEAILQGEPGSNGDPGTGG
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcgcgcccgtccgtcctcaccgaccccgagcagctcaaagagctcctcggcatc
cccttcacgcccgaacagctggcctgcgtcaccgccccgcccgccccgcaggtcatcgtc
gccggcgccggctccggcaagaccaccgtcatggccgcccgcgtggtctggctggtgggc
accggcgtggtcgcgcccgagcaggtcctcggcctgacgttcaccaacaaggccgccggc
gagctcgccgagcgcgtgcgcaaggccctggcgcgggccggcatcaccgacccggacccc
tccccggccgacgccgcgaccgccggcggcgagccgcggatcgccacctaccacgccttc
gccggacagctgctgaaggaccacggcctgcgcatcggcctggagcccagcgcccgactc
ctcgccgacgccacccgcttccagctcgccgcgaaggtgctgcgcgaggccccgggcccg
tacccctcgctcaccaagtccgtccccgacctggtcggcgacctgctcgcgctcgacgcc
gagctctccgaacacctcgtccccccggaccggctgcgcgcctgggacaccgctctgctc
gacaccctcgccggcacccggctcaccaacgaggacctgcgcaaggtgccggaggccgtc
cgcggccgcctcgaactgctggagctcgtcgcccgctaccgcacggccaagcgctcccgc
gacctcttcgacttcagcgaccagatagccctctccgcgcagctcgccaccacccgcccc
gaggtcggggcgctgctgcgcgaggagttccgggtggtcctgctcgacgagtaccaggac
acctccgtcgcccagcggctgctgctgtccgggctcttcggcgcgggcagcgggcacgcc
gtcaccgccgtcggcgacccctgccaggccatctacgggtggcgcggcgcctccgtcgcc
aacctcgacgacttccccgcccacttcccgcacgccgacggcagccccgccacccgcttc
tccctcagcgagaaccggcgcagcggcggccgcctcctggacctggccaacggcctcgcc
gcccccctgcgcgccctgcacgagggcgtcgaggcgctgcgcccggccccgggcgccgag
cgcgacgggctggtgcgctgcgccctgctccccacgcacgccgaggagctggactggctc
gccgactccgtcgcccacctggtccgcaccggcacggagccgcgcgagatcgccgtcctg
tgccgttccgccggggacttcgcgcggatccaggccgtcctggtcgaccgcgacgtcccg
gtcgaggtggtcggcctgtccgggctcctgcacctgcccgaggtcgccgacctcgtcgcg
gtctgcgaggtcctccaggacccgggcgccaacgcctccctggtccggctcctcatcggc
ccgcgctggcggatcggggcgcgcgacctcgcgctgctgggccggcgggcacggctgctc
gtcggccgggcccccggcggcggtggcaccgacgccgacgagcggctcgcggcggccgtg
gagggggtggacccggccgaggtcgtctcgctggccgacgcgctggagaccttcctcgac
ggcgccggcgcgacccccgacgacctgccgttctcggccgaggcccgggtccgcttcgcc
cacctcgcccaggagctgcgcgacctgcggcgctcgctcgccgacccgctgatggacgta
ctgcaccgggtcctgacggcgaccggcctggaagtggagctgtccgcctccccgcacgcg
ctcgcggcccgccgccgcgagaccctgtcgaacttcatggacgtcgccgcgggcttcgcc
gccctcgacggccaggcctcgctgctcgccttcctggccttcctgcggacggccgcccag
tacgagaagggcctggaccacgccctgcccggcggggagaacacggtcaaggtgctgacc
gcgcacaagtccaagggcctggagtgggacgtggtcgtcgtccccgacctgtgcgccggc
tccttcccgaaggagaagcccccggaggcctggacctcgtacgccaaggtcctcccgtac
gccctgcgcggcgacgccccgaccctgcccggcgaccccgcctggacctcggccggcctg
aagtccttcaaggccgccctcaaggaccacaaggccgtggaggagctccgcctcggctac
gtgacgttcacccggccccgctccctcctgctggcctcgggccactggtgggggccgagc
cagaagaagcggcgcgggccgtccgcgttcctcaccgcgctgtacgggcactgcgcggcc
gggtacggggagatcgaggcctgggcgcccgagccggacgccgacgcggagaacccggcg
ctgtccgccgtgtccgaggccgaccgctcctggccgctgccgctggacccggactccctg
cggcggcggcgcgcggcggcggccctggtcgaagcccacctcgcggccccgccgccggcc
ccggaggaccccgacgggtacctgtggccgccgcactgcgaggacccggcccacgaggac
gaaccccgccccccggaaaccaccccgcccacccccgccctcccgcacccccgcaccacc
cgcgccgaaccgcccgcggacgacccgtgggccgaggacccgtgggccgacgagcccgct
cccggccgcggccgcaccaccacggcgacccccgccgaggcggcctccgacgacgacgac
ccgtgggccggcgagccctgggccgagggccccggagcctccgacgcagccctcccgcac
ccccgcaccaccaccggcaccggcaccggcaccggcaccgagccgtccgccgacgccccc
cgggccgatgacccgtgggtcgatgacccctgggccgccgagccctgggccgccgggccc
tgggcggtgccgggcccgggcggccggggcgcgggcgagggcggcgctgcgggcgggctg
tccgccgaggaggcgcgggccgtcgcctcctgggaccgcgacctcgacgccctggagggc
gagctgcgccgtgcccgcgccgccgtgcgggacgtggagctgcccgccgcgctctccgcc
agccagctgctgcggctcgccgccgacgagcagcgcttcgcccgcgacctcgcccgcccc
atgccccagcccccccagccggccgcccgccagggcacccgcttccacgcctgggtcgag
tcccgcttcgacgagctcccgctcccgatgctcgacgtcctcgaccccgccaccgagctg
cccggctccgaccaggacatcgccgacgaggccgatctcgcctccctcaaggccgccttc
gagcgcagcccgtacgccgaccggcccccgcaccgcatggaggcccccgtccaggtcacc
ctggccggccgggtcgtccggggccgcatcgacgccgtctaccgcgacccggacggctcg
tacgagatcgtcgactggaagaccggccggaccaccgaggccgatccgctccagctcgcc
gtctaccgcctggcctgggcggaagccaccggcaccccgctggaccgggtcgcggccgtc
ttcctgcacgtccgcagcggccgcgtgatccgcccccgcgacctccccgaccgggccggc
cttgaggcgatcctccaaggcgaaccgggctcgaacggcgaccccggaacaggcggctag
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