Streptomyces subrutilus: CP968_13540
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Entry
CP968_13540 CDS
T07087
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssub
Streptomyces subrutilus
Pathway
ssub03420
Nucleotide excision repair
ssub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP968_13540
03430 Mismatch repair
CP968_13540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssub03400
]
CP968_13540
Enzymes [BR:
ssub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP968_13540
DNA repair and recombination proteins [BR:
ssub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP968_13540
MMR (mismatch excision repair)
Other MMR factors
CP968_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEU79200
UniProt:
A0A5P2UJM6
LinkDB
All DBs
Position
complement(3135261..3137912)
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AA seq
883 aa
AA seq
DB search
MSSLFDDSFLADLTPSDEVPPPPEDHPAPETGADDLFGGRFDVPMSTDAYYRDGAPRPVI
DPAALLDGLNTEQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIGHLLSARGVHPGQILAIT
FTNKAAGEMKERVEGLVGPRANAMWVSTFHSACVRILRRESKRLGFTSSFSIYDAADSKR
LMALVCRDLDLDPKKFPPKAFNAKISNLKNELIDDEAFADQAADGFEKTLAQAYAMYQGR
LREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGTG
YPDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYKDATTILLEQNYRSTQTILSAAN
AVIERNENRRAKNLWTEAGTGAVITGYVADTEHDEAQFVADEIDRLTDAGDAKAGDVAIF
YRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDNVPLRRILNV
PKRGIGERAEAMIDALAMREKITFPQALRRVDEAFGMAARSTNAVKRFNVLMEELRTIVD
SGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQAREAAAAEAAE
ATADGTTADGTDDAAAVGVAEGAADGAGAQDGGVGAADPAGAAAAAAGPGTLAQFLEQVA
LVADSDQIPDEETEGTGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRALGQTKELEEE
RRLAYVGITRARERLYLTRSSMRSAWGTPSYNPPSRFLEEIPAEYLQWKRTGASQKPAGP
MRSGYGSGSGSGSGGGKATFGTSPESFLSSSRTKTGPSGFATRRAADKPVIALAVGDRVT
HDQFGLGTVMEVRGAGADAQATIDFGDDKPKRLLLRYAPVQKL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagtttcctggcggacctcaccccctccgacgaggtcccc
ccgccgcccgaggatcaccccgctccggaaacgggcgcggacgatctcttcgggggccgg
ttcgacgtgccgatgagcacggacgcgtactaccgggacggcgccccccggcccgtcatc
gacccggcggcgctcctggacggcctgaacacggagcagcgcgcggccgtggtgcacgcc
ggctcgccgctgctcatcgtggccggcgcgggctcggggaagacccgggtgctgacccac
cgcatcgggcacctgctgtccgcgcgcggcgtccaccccggccagatcctggcgatcacc
ttcaccaacaaggccgccggcgagatgaaggagcgcgtcgagggcctggtcggcccgcgc
gccaacgccatgtgggtctccaccttccacagcgcgtgcgtgcgcatcctgcgccgcgag
tccaagcgcctcggcttcacgtcctcgttctcgatctacgacgcggccgactcgaagcgc
ctgatggcgctcgtctgccgcgatctggacctggacccgaagaagttcccgccgaaggcc
ttcaacgccaagatctcgaacctgaagaacgagctgatcgacgacgaggccttcgccgat
caggcggccgacggcttcgagaagaccctcgcccaggcctacgcgatgtaccaggggcgg
ctgcgcgaggccaacgcgctcgacttcgacgacatcatcatgaccacggtccacctgctc
caggcgttcccggacgtcgccgagcactaccggcgccggttccggcacgtcctggtcgac
gagtaccaggacaccaaccacgcgcagtacacgctcgtgcgcgagctggtcggcaccggc
tacccggacctgccgcccgccgagctgtgcgtggtgggtgacgcggaccagtcgatctac
gccttccgcggcgcgaccatccgcaacatcctccagttcgaagaggactacaaggacgcg
acgacgatcctgctggagcagaactaccgctccacccagacgatcctctccgccgccaac
gcggtcatcgagcgcaacgagaaccgccgcgcgaagaacctgtggaccgaggccggcacc
ggggccgtgatcaccggctacgtcgcggacaccgagcacgacgaggcccagttcgtcgcg
gacgagatcgaccggctgacggacgccggcgacgccaaggccggcgacgtcgcgatcttc
taccggacgaacgcgcagtcccgcgtgttcgaggagatcttcatccgggtcggcctgccc
tacaaggtcgtcggcggcgtccgcttctacgagcgcaaggaggtccgcgacgtcctcgcg
tacctgcgcgtgctggcgaacccggaggacaacgtcccgctccgccgcatcctgaacgtg
cccaagcgcggcatcggcgagcgcgcggaagcgatgatcgacgcgctcgcgatgcgcgag
aagatcaccttcccgcaggcgctgcgccgcgtggacgaggccttcggcatggccgcccgc
tcgaccaacgcggtcaagcggttcaacgtgctgatggaggagctgcgcacgatcgtcgac
tcgggcgcgggccccgcggtggtgctggaggcggtcctggagcgcacgggctacctcgcc
gagctccaggcctcgacggacccgcaggacgagacgcggatcgagaacctccaggagctg
gcggccgtggccctggagttcgagcaggcgcgcgaggccgcggcggcggaggcggccgag
gcgacggcggacgggacgacggcggacgggaccgacgacgcggctgcggtcggtgtcgcc
gagggcgccgcggacggggcgggggcgcaggacggtggcgtcggcgcggccgatccggcc
ggtgcggcggccgcggccgccgggcccgggacgctggcccagttcctggagcaggtcgcg
ctcgtcgccgactccgaccagatcccggacgaggagaccgagggcacgggggtcatcacg
ctcatgaccctgcacaccgccaagggcctggagttcccggtggtcttcctgaccggcatg
gaggacggggtcttcccgcacatgcgcgcgctgggccagaccaaggagctggaggaggag
cggcgcctcgcgtacgtcgggatcacccgggcgcgcgagcggctgtacctgacccgctcc
tcgatgcgcagcgcgtgggggaccccctcctacaacccgccgtcgcggttcctggaggag
atcccggccgagtacctgcagtggaagcgcaccggcgcctcccagaaaccggccggaccg
atgcgctccggttatggttcgggctccggatcgggttccggcggcggcaaggcgacgttc
ggcacgtcccccgagtcgttcctgtcctcgtcgcgcacgaagacgggaccgtccggcttc
gccacgcgccgcgcggccgacaagccggtcatcgcgctggcggtcggggaccgcgtgacg
cacgaccagttcggcctgggcaccgtcatggaggtcaggggagcgggcgcggacgcgcag
gccaccatcgacttcggcgacgacaagcccaagcggctgctgctgcgctacgcgccggtg
cagaagctctag
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