Streptomyces subrutilus: CP968_14170
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Entry
CP968_14170 CDS
T07087
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ssub
Streptomyces subrutilus
Pathway
ssub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP968_14170 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssub03021
]
CP968_14170 (rpoB)
03400 DNA repair and recombination proteins [BR:
ssub03400
]
CP968_14170 (rpoB)
Enzymes [BR:
ssub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP968_14170 (rpoB)
Transcription machinery [BR:
ssub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP968_14170 (rpoB)
DNA repair and recombination proteins [BR:
ssub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP968_14170 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QEU79312
UniProt:
A0A5P2UJG4
LinkDB
All DBs
Position
complement(3256345..3259827)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAASRNASTNTNNGASSAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKSRVESA
LESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPAKNSVDECKERDFTYAAPL
FVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSIDK
TSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEFG
EYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGR
YKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETTGESGRSIVVETDDIDHFGN
RRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQ
LSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIG
LIGSLASYGRVNAFGFVETPYRKVIDGVVTDDVDYLTADEEDRFVIAQANAGLNDEMRFT
ENRVLVRRRGGEIDYIAGDDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQA
VPLIKAEAPLVGTGMEYRCAVDAGDSIRAEKDGVVQEVSADYITVANDDGTYTTYRVAKF
SRSNQGTSVNQKVIVNEGDRIIESQVLADGPATEEGEMALGKNLLVAFMPWEGHNYEDAI
ILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGAD
VVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDR
EEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDI
ILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLAEDWAERLKVIGADKVEPGTNVATPV
FDGAREDELAGLFEHTIPNRDGDRLVLPSGKARLFDGRSGEPFPDPISIGYMYILKLHHL
VDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDV
TGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVFR
AAEELGIDLSRREPSSVEEV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccaatacgaacaacggtgccagcagcgccccgctg
cgcatctcctttgcaaagatcaaggagcctctcgaggttccgaacctcctggcgctgcag
accgagagctttgactggcttctcggcaacgcggcctggaagtctcgcgtcgagtcggcg
cttgagagtggacaggacgtccccaccaagtccggtctggaagagatcttcgaggagatc
tcgccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgtttcgag
ccggcgaagaactctgtcgacgagtgcaaggagcgcgacttcacgtacgcggctccgctg
ttcgtcacggccgagttcacgaacaacgagaccggagagatcaagtctcagacggtcttc
atgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgagcgt
gtcgtcgtgtcgcagcttgtccgctcccccggtgtctacttcgactcctcgatcgacaag
acgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctggag
atggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcagtcc
gtcaccgtcctcctgaaggctctcggctggaccaccgagcagatcctggaggagttcggc
gagtacgagtccatgcgcgccaccctggagaaggaccacacccagggtcaggacgacgcg
ctgctcgacatctaccgcaagctgcgtccgggcgaaccgccgacccgcgaggccgctcag
acgctgctcgagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggccgc
tacaaggtgaacaagaagctcggcgccgacgagccgctggacgccggggtgctcaccacc
gacgacgtcatcgcgacgatcaagtacctggtcaagctgcacgccggcgagaccgagacc
accggtgagtccggccgttcgatcgtcgtcgagaccgacgacatcgaccacttcggcaac
cgtcgtctgcgcaacgtcggcgagctcatccagaaccaggtccgcacgggtctggctcgt
atggagcgcgtcgtccgcgagcggatgacgacccaggacgtcgaggcgatcacgccgcag
accctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagccag
ctgtcgcagttcatggaccagaacaacccgctgtcgggtctgacgcacaagcgtcgtctc
tcggctctgggtcccggtggtctgtcccgtgagcgggccggcttcgaggtccgtgacgtg
cacccgtcgcactacggccgcatgtgtccgatcgagacccccgaaggcccgaacatcggt
ctgatcggctcgctcgcctcctacggccgcgtcaacgcgttcggcttcgtcgagaccccg
taccgcaaggtcatcgacggtgtcgtcacggacgacgtcgactacctgaccgccgacgag
gaagaccgcttcgtcatcgcccaggccaacgccggcctgaacgacgagatgcgcttcacc
gagaaccgcgtgctggtccgccgccgtggcggcgagatcgactacatcgccggcgacgac
gtcgactacatggacgtctccccgcgccagatggtgtccgtcgcgaccgcgatgatcccc
ttcctggagcacgacgacgccaaccgcgccctcatgggcgcgaacatgatgcgccaggcc
gttccgctcatcaaggcggaggcgccgctcgtcggcaccggcatggagtaccgctgtgcg
gtcgacgccggtgactcgatccgcgcggagaaggacggtgtggtccaggaggtctcggcc
gactacatcaccgtcgccaacgacgacggcacgtacaccacgtaccgcgtcgccaagttc
tcccgctcgaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgaccgg
atcatcgagtcccaggtcctcgccgacggtcccgcgaccgaagagggcgaaatggccctc
ggcaagaacctgctcgtggcgttcatgccgtgggaaggccacaactacgaggacgcgatc
atcctgtcgcagcgcctcgtacaggacgacgtcctctcctcgatccacatcgaggagcac
gaggtcgacgcccgtgacaccaagctgggccccgaggagatcacccgggacatcccgaac
gtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcggac
gtcgtcgccggcgacatcctggtcggcaaggtcacgcccaagggcgagaccgagctgacc
cccgaggagcgcctgctccgcgcgatcttcggtgagaaggcccgcgaggtgcgcgacacc
tcgctcaaggtccctcacggtgagatcggcaaggtcatcggtgtccgcgtcttcgaccgc
gaggagggcgacgagcttcctccgggcgtgaaccagctggtccgcgtctacgtcgcccag
aagcgcaagatcaccgacggcgacaagctcgccggccgccacggcaacaagggcgtcatc
tccaagatccttccgatcgaggacatgcccttcctggaagacggcacgccggtcgacatc
atcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatccac
ctcggctggctcgccagccgcggctgggacgtctccggcctggccgaggactgggccgag
cggctgaaggtcatcggcgccgacaaggtcgagcccggtaccaacgtcgccaccccggtg
ttcgacggtgcccgtgaggacgagctcgccggcctgttcgagcacaccatcccgaaccgc
gacggcgaccgcctggtcctcccgtccggcaaggcgcgtctgttcgacggccgctccggt
gagccgttcccggacccgatctcgatcgggtacatgtacatcctcaagctccaccacctg
gtcgacgacaagctccacgcgcggtcgaccggtccgtactcgatgatcacgcagcagccg
ctgggtggtaaggcacagttcggtggccagcgattcggtgagatggaggtgtgggcgctc
gaggcttacggcgccgcatacgccctccaggaactgctgaccatcaagtccgacgacgtc
accggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgaaccgggc
attcccgagtccttcaaggtgctcatcaaggaaatgcagtcgctctgcctcaacgtggag
gtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttccgc
gcggcggaggagctcggtatcgacctgtcccggcgtgagccgagcagcgtcgaagaggtc
tga
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