Streptomyces subrutilus: CP968_25420
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Entry
CP968_25420 CDS
T07087
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssub
Streptomyces subrutilus
Pathway
ssub03030
DNA replication
ssub03430
Mismatch repair
ssub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP968_25420
03430 Mismatch repair
CP968_25420
03440 Homologous recombination
CP968_25420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssub03032
]
CP968_25420
03400 DNA repair and recombination proteins [BR:
ssub03400
]
CP968_25420
Enzymes [BR:
ssub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP968_25420
DNA replication proteins [BR:
ssub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP968_25420
DNA repair and recombination proteins [BR:
ssub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP968_25420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QEU81185
UniProt:
A0A5P2USC9
LinkDB
All DBs
Position
complement(5719271..5720248)
Genome browser
AA seq
325 aa
AA seq
DB search
MTMLDDRTTAETTWPTAYPQGYAVVDVETTGLARDDRIVSAAVYRLDALGNVEDHWYTLV
NPQRDPGPVWIHGLTTDVLRDAPLFADIAEEFAGRLADRVLVAHNAIFDWQMIAREYARA
AVTAPVRQRLCTIALSKELNLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSL
HAAARDGVRLPLLECRPLTEWSDSPVTPRVGHQAAYRGGGWRPSRRRPPCPHPNPGRFQD
GEPLKQGMRIAFSGDTSVDRELLEDRAVEAGLHIATSVSRLTSLLVTNDPDSATSKTLKA
RSFGTPVVDEAAFTQLLRDVAAVED
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctcgacgaccgtacgaccgcagagacgacctggccgaccgcgtacccacag
gggtacgcggtcgtcgacgtggagaccaccgggctcgcgcgcgacgaccggatagtgtcc
gccgccgtctaccggctcgacgcgctgggcaacgtcgaggaccactggtacaccctggtc
aacccgcagcgcgacccggggccggtgtggatccacgggctgacgaccgacgtgctgcgg
gacgctcccctcttcgcggacatcgccgaggagttcgcgggccggctcgcggaccgggtg
ctggtcgcgcacaacgccatcttcgactggcagatgatcgcccgggagtacgcgcgggcc
gcggtgaccgcgccggtccgtcagcggctgtgcaccatcgccctgtcgaaggagctgaac
ctgccgctgcccaaccacaagctggagtcgctcgccgcgcacttcggcgtggtccagcag
cgcgcccaccacgccctcgacgacgccagggtgttggccgaggccttccggccgtcgctg
cacgcggcggcccgcgacggggtgcggctgccgctgctggagtgccggccgctgacggag
tggtcggactccccggtgaccccgcgggtgggccaccaggccgcgtatcgcggcggcggg
tggcgcccctcgcgcaggcggccgccgtgcccgcaccccaacccggggcgcttccaggac
ggcgagccgctgaagcagggcatgcggatcgccttctccggcgacacctcggtggaccgc
gagctgctggaggaccgcgccgtcgaggcgggcctgcacatcgcgacgagcgtgtcgcgg
ctcaccagcctgctcgtgacgaacgacccggactcggcgacctcgaagaccctcaaggcc
aggtccttcggcacgccggtcgtggacgaggcggccttcacccagctgctgcgggacgtg
gccgccgtcgaggactga
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