Staphylococcus succinus: ACSSAF_04125
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Entry
ACSSAF_04125 CDS
T11224
Symbol
cshA
Name
(GenBank) degradosome RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ssuc Staphylococcus succinus
Pathway
ssuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACSSAF_04125 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssuc03019
]
ACSSAF_04125 (cshA)
03009 Ribosome biogenesis [BR:
ssuc03009
]
ACSSAF_04125 (cshA)
Enzymes [BR:
ssuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACSSAF_04125 (cshA)
Messenger RNA biogenesis [BR:
ssuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACSSAF_04125 (cshA)
Ribosome biogenesis [BR:
ssuc03009
]
Prokaryotic type
rRNA helicases
ACSSAF_04125 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XXR30805
LinkDB
All DBs
Position
873662..875182
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AA seq
506 aa
AA seq
DB search
MQNFKELGISDKMAETLETMGFSDATPIQKESIPLALEGKDVLGQAQTGTGKTGAFGIPL
IEKVAGREGVQSLILAPTRELAMQVAESIKEFSKGQNVQVVTVFGGMPIDRQIRSLKKGP
QVVVGTPGRVIDHLNRRTLKTTDIHTLILDEADEMMNMGFIDDMKFIMDKIPASQRQTML
FSATMPKAIQTLVQQFMKSPVIVKTMNNETSNPQIEEFYTIVKELEKFDTFTSFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAITFVNPIEMDYIRQIEQANK
REMQALRPPHRKEVLKARENDIKGKVQNWMTRENEPRLQRIASELIEEYSDVDLVASLLQ
ELVESNDDVDVQLTFEKPLSRKGRQSKGPRRGGNNNKRGNNNKFDNKNRRSKGGFNNNKK
KNEKPSSDKNNNKKSMKGRTFADHKK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaattagggatctcagataagatggcagaaaccctagaaacaatg
gggttcagtgatgccactcctattcaaaaagagagtatccctcttgccttagaaggcaaa
gacgttcttggccaagcgcaaactggtacaggtaaaacaggcgcatttggtattccgtta
atcgaaaaagtagcgggtcgagaaggtgttcaatcactaatccttgcaccaacaagagaa
ttagctatgcaagtagctgaatctattaaagaatttagtaaaggccaaaacgtacaagtc
gttactgtttttggtggtatgccaatagatcgtcaaattagatctcttaaaaaaggacca
caagtagtagtaggtacaccaggtcgtgtaattgaccatttaaaccgtcgtactttgaaa
actactgatattcatacgcttatattagatgaagcggatgaaatgatgaacatgggcttc
atcgatgatatgaaatttatcatggacaaaatcccagcatcacaacgtcaaacaatgttg
ttttctgctacaatgccgaaagcaatccaaacactagtacaacaatttatgaagtctcca
gttattgttaaaacaatgaacaatgaaacttcaaatcctcaaattgaagaattctataca
attgtaaaagaattagaaaaatttgatactttcacaagctttttagatgtacatcagcca
gaattagcaattgtattcggacgtacaaaacgtcgtgtagatgaattaacaagtgcgtta
atttctaaaggatataaagctgaaggcttacatggtgatattacacaagctaaacgttta
gaagtattgaaaaaattcaaaaacgatcaactagatatcttagttgcgactgatgttgca
gcaagaggacttgatatttcaggcgtgagtcatgtttataacttcgatatccctcaagat
acagaaagttatactcatagaatcggacgtacaggtcgtgctggtaaagaaggtattgca
attacatttgttaacccaattgagatggattacatccgtcaaattgaacaagctaacaag
cgagaaatgcaagcattaagaccacctcatcgtaaagaagtgttaaaagcacgtgaaaac
gatattaaaggtaaagttcaaaattggatgactagagaaaatgaacctagattacaacgc
attgcttctgaattaattgaagaatatagcgatgttgatttagttgcttcattattacaa
gaattagtagagtcaaatgatgatgttgatgtacaattaacatttgaaaaaccattatct
cgtaaaggccgtcaaagcaaaggcccaagacgtggtggtaataacaataaacgtggtaac
aacaacaagttcgataacaaaaatcgtcgctcaaaaggcggattcaacaataacaagaag
aagaacgaaaaaccttcttctgacaaaaacaataacaagaaatcaatgaaaggtcgcaca
ttcgcagaccataaaaaatag
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