Staphylococcus succinus: ACSSAF_05645
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Entry
ACSSAF_05645 CDS
T11224
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssuc Staphylococcus succinus
Pathway
ssuc03030
DNA replication
ssuc03430
Mismatch repair
ssuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACSSAF_05645
03430 Mismatch repair
ACSSAF_05645
03440 Homologous recombination
ACSSAF_05645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssuc03032
]
ACSSAF_05645
03400 DNA repair and recombination proteins [BR:
ssuc03400
]
ACSSAF_05645
Enzymes [BR:
ssuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACSSAF_05645
DNA replication proteins [BR:
ssuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACSSAF_05645
DNA repair and recombination proteins [BR:
ssuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACSSAF_05645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XXR31058
LinkDB
All DBs
Position
1158956..1162159
Genome browser
AA seq
1067 aa
AA seq
DB search
MVAHLNIHTTYDLLNSSLRIKDVVTKAAKEGYTALAITDTNVLYGYPQFYDACIAANMHP
IFGMTIYVTDGLSEVETIVLAQNNQGLKDLFKLSSAIKMKEKTETPVEWLKKYSQHFVVI
FKNVDQSHQTIISEFNKEANIYVNHTSQVSYDLPIVWAQNTCYLNREDAETLTALAAIKD
NSKLDLVSEQQDYDAHLYGQQDLSELSLSKDIWHNTNELATLCNAELRYHQSLLPKFKTT
DNQPSKDYLWSLLESSLQRLNLAEHKVAQYKRRLLHEYQIITDMGFEDYFLIVSDLIHYA
KTHDILVGPGRGSSAGSLVSYLLNITTMDPIEYNLLFERFLNPERVTMPDIDIDFEDTHR
DKVIQYVQEKYGSHHVAGIVTFGHLLARAVARDVGRIMSFDDITLNEISKLIPHKLGITL
DEAYAQEDFKQFVHRNHRHERWFEICKKLEGLPRHTSTHAAGIIINDHPLYEYAPLTLGD
TGLLTQWTMTEAERVGLLKIDFLGLRNLSIIHQIVKQVRSDMNVSIDIEQIPFDDEKVFQ
LLSRGDTTGIFQLESDGIRNVLQKLQPEHFEDIVAVTSLYRPGPMEEIPTYISRRHDSTK
VKYLHEDLQPILKKTYGVIIYQEQIMQIASKFAGFNYGEADILRRAMSKKNRAVLESERH
HFVEGALKNGYSESLSKQIFDLILKFADYGFARAHAVSYSKIAYIMSYLKVYYPNYFYSN
ILSNTIGSEKKTSQIIDEAKHQNLNILSPHINYSHWFYKATKEGIYLSIGVIKGVGYQSV
KLIVDERKANGYFKDFFDFARRIPKRIKSRKLFEALILVGAFDAFGKNRATLLQAIDQVL
DDVSNVEQDGFIFDVLTPKTTYEEKGELPDKVLSDYEKEYLGFYVSTHPVEKTFEQKQYL
GIYKLTNARDHQPILIQIDSSKKIRTKNGQNMAFVTLNDGLNNLDGVIFPDAYKKYESLL
NGDDVFIVRGKFDNRNNKKQLIINQIESIEAYESYIFNNAKQIVIRNLNDEPELEQYITQ
NKDNDHIPVEYFQEGQNNFKTIGYVVRNNASIRELIQMFSPWDIRII
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcatttaaatattcacacaacatatgatctattaaattctagtttaagaatt
aaagatgtggtgactaaagctgcaaaagagggttatacagccttagccatcacagataca
aacgttttatatggctatccacagttttatgacgcatgtatagcagcgaatatgcatcct
atttttggtatgacaatctatgtaacagatgggttatccgaggttgaaacaatcgtctta
gctcaaaacaaccaagggttaaaagatttattcaagttatcttcagctatcaaaatgaaa
gaaaaaacagaaacccctgtagagtggttgaaaaaatattcacaacattttgttgtcata
tttaaaaatgtagatcaatcacaccaaactattatttctgagtttaacaaggaagcaaat
atatatgtgaatcatacgagtcaagtatcatacgatttacctatcgtatgggcacaaaat
acatgctatctaaatcgggaggatgctgagacgttaacggcattagccgcaattaaagat
aattcgaaattagatctagtaagtgaacaacaggattatgatgcgcatttgtatggtcaa
caagatttaagtgaactcagcctaagcaaagatatatggcataatacaaacgaactggca
acgctttgtaatgctgaactacgctaccaccaatctttgctgccaaaattcaaaacgaca
gataatcagccgtctaaagattatttgtggagtttattagaaagtagcttacagcgatta
aacttagctgaacacaaagtagcgcaatataagcgtaggttgttacatgaatatcaaatt
atcactgacatgggatttgaagattatttcttaatagtaagtgatttaatacattatgct
aaaacacatgatatcttagtgggaccaggccgtggctcttctgctggttctctcgtgagt
tatttattaaatattactactatggatccaatagaatataaccttttattcgaacggttt
ttaaatccagaacgtgtcacaatgccagatatagatattgattttgaagacacacatcgc
gacaaggtgattcaatatgttcaagaaaaatacggttcccatcatgtagcaggtattgta
acgtttggtcatctattagcaagagctgtagcaagagatgtgggcagaattatgagtttt
gatgatattacgctaaatgaaatttctaaattgattccacacaagttaggtattacttta
gatgaagcatacgctcaggaggattttaaacaatttgtgcaccggaatcataggcatgag
cgatggtttgagatatgtaaaaagttagagggcttacctcgccatacatctacgcatgca
gctggaattattattaatgatcatcctttatatgaatatgcaccacttactttaggagat
acaggacttttaacgcaatggactatgacagaagctgagcgggtaggtctgttgaaaatt
gacttcttaggactgcggaatttatcaatcatacatcaaattgttaaacaagttcgtagt
gatatgaatgttagcatagacatagaacagataccgtttgatgatgagaaagtgtttcaa
ctattatctagaggcgacaccacaggtatatttcaactcgaatcagatggtattagaaat
gtattacaaaaattacaacctgaacattttgaagatatcgtagctgtgacttcactttat
agacctggtccaatggaagaaataccaacttatatttcaagaagacacgattctacaaaa
gttaaatatttacatgaagatttacaacccatattaaaaaagacatatggagttattatt
tatcaagaacaaattatgcaaattgcgagtaagtttgctggatttaattatggtgaagcg
gacattttaagacgtgcaatgagtaagaaaaatcgagctgtgctagaaagtgaacgacac
catttcgttgaaggtgcattaaaaaatggttatagcgaaagtttgagtaaacaaatattt
gatttaatattaaaatttgcagattatggctttgcacgtgcacatgcagtgagttattcc
aaaatcgcatatatcatgagttatttgaaggtttactatcccaattatttttattcaaat
attttaagtaacacaatcggtagtgagaaaaaaacatcacaaattattgatgaagcaaaa
catcaaaatttaaatattctttctccacatattaattatagtcattggttttacaaagcc
actaaagaaggtatctatttatcgataggtgtaattaaaggcgtaggctatcaaagcgtt
aaattgattgttgatgagcggaaagcaaatggatattttaaagacttttttgattttgcc
agacgtataccgaaaaggataaaatcaagaaagctatttgaagcattaatacttgtaggt
gcatttgatgcatttggaaaaaatagagccacgctattacaggctattgaccaagtgttg
gatgatgtgtctaatgttgagcaggacggatttatattcgacgttttaacgcctaaaaca
acatatgaagaaaaaggtgaattacccgataaagtattaagtgattatgaaaaggaatat
ttaggtttttatgtgtctacgcatccagttgaaaagacatttgagcaaaaacaatatctc
ggtatttataaactaacgaatgcgcgagatcatcaaccaatattaattcaaattgatagt
agtaaaaagatacgcaccaaaaatggtcaaaacatggcatttgtaacattgaatgatgga
ttgaataatttagatggtgtcattttccctgatgcatataaaaaatatgagtcattatta
aatggagacgacgtttttattgtcagaggtaagtttgataatcgaaataataagaaacaa
cttattatcaatcaaatagaatctatagaagcatatgaatcatacatttttaataacgca
aaacaaattgttattagaaatttaaatgacgaacctgaattagaacaatacattactcaa
aataaagataatgaccatataccagtagaatactttcaagaaggtcagaataactttaaa
acaataggctatgtggtccgtaataatgcatcaattagggaattaatacaaatgttttct
ccttgggatattagaattatttaa
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