Staphylococcus succinus: ACSSAF_05985
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Entry
ACSSAF_05985 CDS
T11224
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssuc Staphylococcus succinus
Pathway
ssuc03410
Base excision repair
ssuc03430
Mismatch repair
ssuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACSSAF_05985 (recJ)
03430 Mismatch repair
ACSSAF_05985 (recJ)
03440 Homologous recombination
ACSSAF_05985 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssuc03400
]
ACSSAF_05985 (recJ)
DNA repair and recombination proteins [BR:
ssuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACSSAF_05985 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACSSAF_05985 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACSSAF_05985 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
V-ATPase_G_2
Motif
Other DBs
NCBI-ProteinID:
XXR31122
LinkDB
All DBs
Position
1233140..1235419
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AA seq
759 aa
AA seq
DB search
MIKSKYTWDVNSPETEITEDVSSDLKLTPIVKKILESKGLTDKSSIADVLNGKQIAHDPW
LMSDMSKAVERINLAIDENQKILVYGDYDADGVTSTTILVDTLKELGAHVGWYIPNRFSE
GYGPNEMAFKNAYDEGISLIITVDNGIQGHDEIQMVQDLGVDVIVTDHHEIGKTMPNAFA
IVHPMHPEYEYPFQYLCGAGVAYKLAQTLLAQPPAYFLGLVAIGTIADLVSLTDENRSLV
QKGLEVLNEHCPVSIKAILKQAGYNDEITEETIGFIIGPRLNAVGRLEDAALAAELLMTE
TDEEAEFLAEQVEFFNQERKDIVAQITDEALQVAETQVQDGSKFLLLAQQDWHEGVLGIV
ASKVVETYGLPTLILNIDEAQNHAKGSARSIEQVSMFDILTAHADLISKFGGHHMAAGVT
MPIENIESLRQGLNQWMNQLAETTSLEPRKKVDVKISESDITIKNIQDIQRLRPFGTDFT
IPCFELEDVLVHQAKGIGQEQKHLKLVMGESQLQAIFWQNGHLVKELGVEQPINVIGTLQ
INEWNGFQSPQFMIQDLASNNLQILDYRSKSKVNEFAQDATDVAYLINKKSEKLDGNYYY
YGDEIQSNYNKYVFRDLPASIEEIKITLKMVDVSQIYLVLNHEHSIYFEGMPKMETFKQC
FKALATKKETNLAQDGMQLCQYLNIQPNMLKFILKVFLDLGFIKDENGIIKMNNISDKRD
IESSKFYQGRLERIQVEKMLLYEDFNNLKQWIKSELIDK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatcaaagtatacttgggacgttaattcacccgaaactgagattacagaggat
gtttcgtcagatttaaaactaactcctattgtaaaaaaaatcttagaaagtaaaggatta
actgataaatcatcaattgctgatgtacttaatggtaagcaaattgcacatgacccatgg
ttaatgagcgatatgtcaaaagcagttgaacgtattaatttagcaatagatgaaaatcaa
aagattttagtctatggtgattacgatgctgatggtgtcacatcgactacaattcttgtc
gatactttaaaagaattaggtgcacatgttggatggtatatacctaatcgcttttcagaa
ggctatgggcctaatgaaatggcctttaagaatgcttatgatgaaggtatttctttaatt
ataactgtagataacggtatccaaggacatgatgaaattcaaatggttcaagacttaggt
gtagatgttattgtgacagaccaccatgaaattggtaaaacaatgcctaatgcctttgcc
attgtacatccaatgcatccagaatatgaatatccatttcaatatttatgtggtgcaggg
gtagcatataaattagcacaaacattattagcacaaccgcccgcatattttcttggctta
gtggctattggaacgattgctgacttagtatctttaactgacgaaaaccgttcgctagta
caaaaaggtctagaagtacttaacgaacattgcccagtttcaattaaagcaatactcaaa
caagcaggttataatgatgaaattactgaagaaacaattggttttatcattggacctcga
ctcaatgcggttggaagattagaagacgctgccttagctgcagaactgttaatgactgaa
acagatgaagaagcagagtttttagcagagcaggtagaattctttaatcaagaacgtaaa
gatatcgttgcacaaattacggatgaagcattacaggttgctgaaacacaagtacaagat
ggatctaaattcttacttttagctcaacaagactggcatgaaggggtactagggatcgta
gcttcaaaggttgttgaaacctatggcttacctacgttaatattaaatattgatgaagca
caaaatcacgcaaaaggatcagcgcgtagtatagaacaggtatcaatgttcgatatctta
accgcacatgcagacttaattagtaagtttggtggccaccatatggcagcaggcgttacg
atgccaattgaaaatattgaatcattaagacaaggacttaatcaatggatgaatcaactt
gctgaaacaacatccttagaacctcgaaagaaagtggatgtgaaaatttctgagtctgat
attactattaaaaatattcaagacatacaaaggttacgtccgtttggtacagattttaca
attccttgttttgaactggaagacgtattagtgcatcaagctaaaggtattggtcaagag
cagaaacatcttaaactcgttatgggtgaaagtcaattgcaagcgatattttggcaaaat
ggacatcttgttaaagagttgggtgtggaacagccaatcaatgttataggtacattacaa
attaatgagtggaatggattccagtcacctcaatttatgattcaagacttagcaagtaat
aatttacagattttagattaccgtagtaaaagtaaagttaatgaatttgcacaagacgcg
acagacgttgcttatttaattaataaaaagagtgaaaaattagatggtaattactattat
tatggtgatgagattcaatcaaactataataaatatgtatttcgtgatttgcctgcttcc
attgaagaaattaaaataacattaaaaatggtagatgtgtcgcaaatttatctcgtttta
aatcatgaacactctatttattttgaaggtatgcctaaaatggaaacatttaaacaatgt
tttaaagcattggcaacgaaaaaagaaacaaatttagcacaagatggcatgcaactctgc
caatatttaaacattcaacccaatatgcttaaatttatactaaaagtttttcttgattta
ggctttataaaagatgaaaatggtataatcaaaatgaataacatttctgacaaaagagat
atcgaatcgagtaagttttatcaaggccgactcgaaagaatacaagttgaaaaaatgtta
ctttatgaagattttaataacttaaaacagtggattaaatcggaactgatagataaatag
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