Staphylococcus succinus: ACSSAF_08225
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Entry
ACSSAF_08225 CDS
T11224
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssuc Staphylococcus succinus
Brite
KEGG Orthology (KO) [BR:
ssuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssuc03016
]
ACSSAF_08225 (truB)
Enzymes [BR:
ssuc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACSSAF_08225 (truB)
Transfer RNA biogenesis [BR:
ssuc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACSSAF_08225 (truB)
Prokaryotic type
ACSSAF_08225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XXR29059
LinkDB
All DBs
Position
complement(1661700..1662617)
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AA seq
305 aa
AA seq
DB search
MYNGILPVYKERGLTSHDVVFKLRKILKTKKVGHTGTLDPEVSGVLPICIGSATKVSDYI
MEMGKSYEATVTLGISTTTEDQTGDTLEQKAVSESEVSPEAIDEVLKQFECIITQIPPMY
SSVKVNGRKLYEYARNNETVERPERQVNIINIKRISDLHFDNDICQFDITVECGKGTYIR
TLATDIGKALNLPAHMSKLTRTQSGGFDLNHSYSLSDIAELHEHEALQRKLFPIEYGLKG
LPQIMITDKTIKAKILNGQKFYKSEFNAAIQTQVVMVDDESEKVLAIYEPHPDKIDEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggtattttacctgtatataaagagcgtggtttaacaagtcatgatgtagta
tttaaattaaggaaaattttaaaaactaaaaaagttggacacactggaaccttagatcca
gaagtttcaggtgtgctccctatctgtataggtagtgctacaaaggttagtgactatatt
atggaaatgggtaaatcttacgaagcaactgtaacacttggtataagtactacaacagaa
gatcaaacgggggataccttagaacaaaaagctgtttctgaaagtgaggtatctcctgaa
gcaattgatgaagttttaaaacaatttgaatgtataatcacacaaattccaccaatgtat
tcatcagtaaaagttaatggaagaaagttatatgaatatgcaagaaataatgaaacagta
gagcgaccagaacgacaggtgaacattataaacattaagcgtatctctgaccttcatttt
gacaatgatatttgtcagtttgatataacagtagaatgtggaaaagggacttatattcga
acactggcaacagatattggaaaagctttaaatttacctgcacacatgtctaaacttaca
agaacacaaagtggtggatttgatttaaatcacagttatagtttaagcgatattgcagaa
ttacatgagcatgaagcgttacaaagaaaattatttccgatagaatatgggttgaaaggt
ttaccgcaaataatgataactgataagacgataaaagctaagattttgaatggacaaaag
ttttataaaagtgagtttaatgctgcaattcaaactcaagttgtcatggtagatgatgag
agtgaaaaagtgttagcaatttatgagcctcatccagacaagatagatgaaattaaacct
aaaaaggtatttaactaa
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