Staphylococcus succinus: ACSSAF_11715
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Entry
ACSSAF_11715 CDS
T11224
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ssuc Staphylococcus succinus
Pathway
ssuc00750
Vitamin B6 metabolism
ssuc01100
Metabolic pathways
ssuc01240
Biosynthesis of cofactors
Module
ssuc_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ssuc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
ACSSAF_11715 (pdxS)
Enzymes [BR:
ssuc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
ACSSAF_11715 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NanE
NMO
IGPS
FMN_dh
TMP-TENI
TetR_C_27
DUF561
IMPDH
TIM
Motif
Other DBs
NCBI-ProteinID:
XXR29722
LinkDB
All DBs
Position
complement(2380834..2381721)
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AA seq
295 aa
AA seq
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MSKVTGSERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVA
RMANPKIVEEVMNAVSIPVMAKGRIGHITEARVLESMGVDYIDESEVLTPADEEYHLRKD
TFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMND
DEIMTEAKNIGAPYEVLKGIKENGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGRLAKELGSAMKGLDINELSLEDRMQERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagttactggatccgaaagagttaaaagaggaatggcagaaatgcaaaagggc
ggcgttatcatggacgttgttaatgcagaacaagctaagattgctgaagaagcaggagct
gttgctgtaatggcattagaacgtgtaccatctgacataagggcagctggcggcgttgca
agaatggccaatcctaaaatcgtagaggaagttatgaatgcagtgtctatacctgtaatg
gctaaaggacgtatcggccatattactgaagcacgtgttttagaatcgatgggtgttgac
tatattgatgagtcagaagtattgacgcctgctgatgaagaataccatttacgtaaagat
acttttacagttccatttgtatgtggttgtcgtaatttaggtgaagctgcgagacgtatt
ggtgaaggtgctgcgatgttacgtaccaaaggtgaaccaggtacaggtaatattgtagaa
gctgtgagacatatgcgtcaagtcaattcagaagtaagtcgtttaactgttatgaatgat
gatgaaattatgactgaggctaaaaatatcggtgctccatatgaagtattaaaaggtata
aaagaaaatggacgtttaccagttgtcaattttgctgctggcggtgtggcaacacctcaa
gatgcagcattaatgatggaattaggagcagatggcgtattcgtagggtctggtatcttt
aaatcagaagatcctgaaaaatttgcgaaagcaattgtacaagcgacaacgcattatcaa
gattatgaattaattggccgtttagctaaagaacttggttctgctatgaaaggtttagat
atcaatgaattatcattagaagatcgtatgcaagagcgtggatggtaa
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