Streptococcus suis T15: T15_1570
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Entry
T15_1570 CDS
T02891
Symbol
deaD
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ssui
Streptococcus suis T15
Pathway
ssui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T15_1570 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssui03019
]
T15_1570 (deaD)
03009 Ribosome biogenesis [BR:
ssui03009
]
T15_1570 (deaD)
Enzymes [BR:
ssui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T15_1570 (deaD)
Messenger RNA biogenesis [BR:
ssui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
T15_1570 (deaD)
Ribosome biogenesis [BR:
ssui03009
]
Prokaryotic type
rRNA helicases
T15_1570 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AGZ23659
LinkDB
All DBs
Position
complement(1581937..1583517)
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AA seq
526 aa
AA seq
DB search
MKFTDLQLSEDILLAVEKAGFETPSPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDTNNQAIQSLIIAPTRELAVQSQEELFKFGREKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLDGVETLILDEADEMLNMGFLDDIEAIIERVPESRQTLLF
SATMPEPIKRIGVKFMKEPEHVKIAAKELTNVNVDQYYLRVKEHEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGYLAIIEDLTKK
RMKGLKPATAEEAFEAKKKVALKKIERDFADDTIRGNFDKFKKDAVKLAAEFTPEELALY
VLSLTVQDPDSLPEVEIAREKPLPFKYAPGQAKGKGGRGGRDRDRGGRRDGDRNRDRGGR
RGDRNDRNRRDDKFKRDNRRQDNKKPHQRTSSEKKTGFVIRNKGER
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttacaattatcagaagatattttgcttgccgttgagaaggctggt
tttgaaacgccgtcaccaatccaggagcagaccattccgcttgctctggaaggaaaagat
gtgattggtcaagcgcagacggggacagggaaaactgcagcctttggtttgccaaccctc
aacaagattgatacaaacaatcaagcaattcaatccttgattatcgccccaacgcgtgag
ttggcggtgcagagtcaggaagagcttttcaaatttggtcgtgaaaaaggagtaaaagtt
cgctctgtttacggtggttctagcattgaaaaacaaatcaaggcccttcgttctggtgct
cacattgttgttggtacacctggtcgtctcttggacttgatcaaacgtaaagctctcaag
cttgacggtgttgaaacccttattcttgatgaggctgatgaaatgctcaacatgggcttc
ttggatgatattgaagccatcatcgaacgtgtgccagaaagccgtcaaactcttctgttt
tctgcaaccatgccagagccaatcaagcgtattggtgtcaaattcatgaaagagcctgag
cacgttaagattgcagcaaaggaattgactaatgtcaatgttgaccaatattatcttcgt
gtcaaagaacatgaaaaattcgacaccatgacacgcctcatggacgttgaccagccagaa
ttgtctatcgtcttcggtcgtactaagcgccgtgttgatgaattgactcgtggtttgaaa
ctgcgtggcttccgtgcagagggtatccacggagatttggatcagaataagcgtcttcgt
gttattcgtgactttaaaaatgaccagattgatgtcctcgttgcgacggacgttgcggcg
cgtggtttggatatttctggtgtaacgcatgtctataactacgatattccacaggatcca
gaaagctatgttcaccgtatcggtcgtacaggtcgtgcgggtcaatcaggtcagtctatt
acctttgtttcgccaaacgagatgggctacttggctattatcgaagatttgaccaagaaa
cgcatgaaagggctcaagccagcgacagctgaagaggcctttgaagccaagaaaaaagtt
gccttgaagaagattgaacgtgactttgcagacgataccattcgtggaaactttgataaa
tttaaaaaagacgcagtcaaattggcagctgaatttacaccagaagagcttgcactctac
gtactcagcctgaccgtacaagatccagatagcttgccagaagtggaaatcgcacgcgaa
aaaccattgccattcaagtatgctcctggtcaagccaagggcaagggtggacgtggtggt
cgcgaccgtgatcgcggtggtcgtcgtgatggagaccgcaaccgagaccgcggaggacgc
cgtggtgatcgtaacgaccgcaaccgtcgcgatgacaagtttaaacgcgacaaccgccgt
caggacaacaaaaaaccacaccaacgcacatcaagtgaaaagaaaacaggctttgttatc
cgcaataaaggggagagataa
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