Streptococcus suis T15: T15_1998
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Entry
T15_1998 CDS
T02891
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssui
Streptococcus suis T15
Pathway
ssui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T15_1998 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssui03019
]
T15_1998 (pnp)
03016 Transfer RNA biogenesis [BR:
ssui03016
]
T15_1998 (pnp)
Enzymes [BR:
ssui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
T15_1998 (pnp)
Messenger RNA biogenesis [BR:
ssui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
T15_1998 (pnp)
Transfer RNA biogenesis [BR:
ssui03016
]
Prokaryotic type
tRNA degradation factors
T15_1998 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AGZ24076
LinkDB
All DBs
Position
complement(1978614..1980833)
Genome browser
AA seq
739 aa
AA seq
DB search
MSKQVFETVFAGKKLVVETGQVAKQANGAVVVRYGDSTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDP
DASAPMAAMFGSSLALAISDIPFNGPIAGVQVGYVNGELIINPDKAQMEESLLDLTVAGN
KDAINMVESGAKELSEDIMLEALLKGHAAIQELLDFQNQIVAAVGKEKADVELLQVDPEL
QAEIVAAYNDDLKKAVQVEEKLAREDATNAVRETVIAAYEEKYAEHEEFDRIMRDVHEIL
ELMEHAEVRRLITEDKVRPDGRRVDEIRPLDAEVDFLPNVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDDEYKKRFLHHYNFPQYSVGSTGRYGAPGRREIGHGALGERALEQVLPS
LDDFPYAIRLVAEVLESNGSSSQASITAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIDGITPQILEEALAQAKKARFEILDVI
EATIPEVRPDLAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAI
FSPDRDAIERTKEIIAGLVREAKVDEVFQAKVVRLEKFGAFVNLFDKTDALVHVSEMAWT
RVNKPEDLVEIGDIVDVKVIKIDDKGRIDASMKALLPKPEGYVEPEKRERSDKPRRPRDH
KEKKDNNFGEFKFHKVEKK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaagtatttgaaacggtttttgctggcaaaaaattggtcgttgaaacaggt
caagttgccaaacaagccaacggtgcggttgtcgttcgctacggtgactccacagtcctt
acagcggcagttatgtccaagaaaatggcgacgggtgatttcttccccctccaagtcaac
tatgaagagaaaatgtacgctgctgggaaattcccaggtggctggatgaagcgtgaaggc
cgtccgtcaactgatgcgaccttgacagctcgtttgattgaccgtccgatccgtccaatg
tttgcggaaggtttccgtaatgaagtccaagtcatcaacacagtgctttcttacgatcca
gatgcttcagctccaatggcagctatgtttggctcgtccttggcattggcaatctcagac
attcctttcaacggcccaatcgcaggcgtgcaagtcggctatgtcaacggtgaactcatc
atcaatcctgacaaggctcagatggaagagtccctccttgacttgacagtggctggtaac
aaggacgccatcaacatggttgagtctggtgccaaagaattgtcagaagacatcatgttg
gaagccctcttgaaaggtcatgcggccattcaagaactccttgacttccaaaatcaaatc
gtagcagcagtcggcaaggaaaaagcagatgtggagctccttcaagtggacccagaattg
caggctgagattgttgcggcttacaatgacgatttgaaaaaagcggtgcaggtagaagaa
aaattggcccgtgaagatgcgaccaatgccgtgcgtgagaccgtcatcgcagcttacgaa
gagaaatacgctgaacacgaagaatttgaccgcatcatgcgggacgttcatgaaatcttg
gagctcatggagcacgcagaagttcgtcgtttgattacagaagacaaggtccgcccagat
ggacgccgtgtcgatgagattcgtcctttggacgcagaagtggacttcttgccaaacgtt
cacggttcaggtctctttacccgcggtcaaacgcaagccctttctgtcttgaccttggca
ccaatgggtgaaactcaaatcatcgacggtttggatgatgagtacaagaaacgcttcttg
caccactacaacttcccacaatactcagtgggatcaacaggtcgttatggagcacctggt
cgtcgtgagattggtcacggagcccttggcgagcgtgcccttgagcaagtcttaccaagt
ctagatgatttcccatatgcaatccgcttggtagcagaagtcttggaatcaaacggttct
tcatcacaggcttctatcacagctggtacccttgcccttatggcaggtggtgtgccaatc
aaggcaccagttgcaggtattgctatgggtctgatttcagacggtaccaactacaccgtc
ttgaccgatattcaaggtcttgaggaccactttggcgacatggactttaaggtggctggt
acccgtgacggtatcacagcccttcaaatggacatcaagatcgacggtatcacaccgcaa
atcttggaagaagccttggcacaagctaagaaggcacgttttgaaatcctcgatgtcatc
gaagcgacgatcccagaagttcgtcctgatttggcaccaactgcaccgaagattgacacc
atcaagattgatgtagataaaatcaagattgtcatcggtaagggtggcgaaaccatcgat
aagattattgcagaaactggcgtgaaaatcgatattgacgaagacggtcttgtggctatc
ttctcaccagatcgcgatgcgattgaacggaccaaggaaatcattgcaggtcttgttcgt
gaagcaaaagtggacgaagtcttccaagcaaaagtggttcgtttggagaaattcggtgcc
tttgtcaaccttttcgacaagactgatgctctggtccacgtttcagaaatggcttggacc
cgtgtcaataaaccagaagacctagttgaaattggcgatattgtcgatgtcaaggttatc
aagattgatgataaaggacgtattgacgcttctatgaaggctcttcttccaaaaccagaa
ggttatgtagagccagaaaaacgcgagcgttcagacaaacctcgccgtccaagagaccac
aaagagaaaaaagacaacaactttggcgagttcaaattccacaaggttgaaaagaaataa
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