Streptococcus suis T15: T15_2027
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Entry
T15_2027 CDS
T02891
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ssui
Streptococcus suis T15
Pathway
ssui03030
DNA replication
ssui03430
Mismatch repair
ssui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T15_2027 (polC)
03430 Mismatch repair
T15_2027 (polC)
03440 Homologous recombination
T15_2027 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssui03032
]
T15_2027 (polC)
03400 DNA repair and recombination proteins [BR:
ssui03400
]
T15_2027 (polC)
Enzymes [BR:
ssui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T15_2027 (polC)
DNA replication proteins [BR:
ssui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T15_2027 (polC)
DNA repair and recombination proteins [BR:
ssui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T15_2027 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
B
Motif
Other DBs
NCBI-ProteinID:
AGZ24105
LinkDB
All DBs
Position
complement(2008992..2013383)
Genome browser
AA seq
1463 aa
AA seq
DB search
MSDKFQLLLQQIGMPLDARQSGAFSTATIEKVVLHKVSKLWEFTFRFETPLPLMDYQLFK
ARLATEFEKVGNKIQFSIVSDAEAFEAGLVEAYYPEAFTEDLCQSAGFKALFQPLEVAYR
DGVLWIKGPETIDTDHFRKNHLPNLVEQYKRFGFGNLAVDIQICQEMTQQQAEIFHAQNE
EIYQQANEENLAALEQLAQMAPPPEAAQPFVPEYKKNRPAKVNIEKAEITPMIEVDSEEN
RIVFEGLVFEVEQKTTKTGRVIINFKMTDYTSSFTLQKWAKNEEEAQKFDMVKKGNWLRV
RGNVETNNFTRDLTMNVQEVQEVKKEIRKDLMPEGEKRVEFHAHTNMSTMDALPAVEDLV
ARAAAWGHKAVAITDHGNVQSFPHGYHAARKAGIKPLFGMEANIVEDSVPIAYNEADVVL
SDATYVVFDVETTGLSAVNNALIQIAASKMHKGNIIAEFDEFIDPGHPLSQFTTDLTGIT
DEHVRGSKPLEQVLREFQDFCQDSVMVAHNATFDVGFMNVNYERAGLPIISQPVIDTLEF
ARNLYPDFKRHGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFLKDALEKHNLTNLNQL
NTELIAEDSYKKARVKHATLYVINQVGLKNMFKLVSLSNTKYFEGVPRIPRTVLNAHREG
LILGTACQEGEVFDDLLSKGIDEAVKTAAYYDFIEVMPPALYAPMIAKEQFKDMAEIEET
IKQLIEVGRRAGLPVLATGNVHYIDPEEEIYREIIVRALGQGAPINWTIGNGENAQPAPL
PKAHFRTTSEMLDEFAFLGESLAREIVITNPNAMLDRFEDVQVVKTDLYTPYIEKAEETV
AELTYQKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVHRSNERGYLVGSR
GSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGSYGSGFDLPDKDCEKCGTKYKK
DGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEENAFRAGTVGTVAAKTA
YGFVRGYERDYGKFYRDVEVERLAAGAAGVKRTTGQHPGGIIVFPDYMDVYDFTPVQYPA
DDVTASWQTTHFNFHDIDENVLKLDILGHDDPTMVRKLQDLSGIDPQTIPADDKGVMALF
SGTEILGVTPEQIGTPTGMLGIPEFGTNFVRGMVEETKPTTFSELLQLSGLSHGTDVWLG
NAQDLIKAGIANLSTVIGCRDDIMVYLMHAGLPPKMAFNIMERVRKGLWLKISEEERNGY
IQAMKDNKVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPLYYYCAYFSIRAK
AFDLATMSGGLDKVKAKMEEIALKKKNNEASNVEQDLYTTLELVNEMLERGFKFGKLDLY
KSHATDFLIEDDTLIPPFVAMDGLGENVAKQVVAARAEGEFLSKTELRKRGGLSGTLVEK
MDEMGILGKMPEDNQLSLFDDLF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataagtttcaactcttgctacaacaaatcggaatgcctcttgatgcacgacaa
tcaggggctttttcgactgcaacgattgagaaagtagtcttgcacaaggtcagcaaactt
tgggaatttaccttccgttttgaaacccccttgccgctcatggactatcaactcttcaag
gctcgtttggcaacggagtttgaaaaggtgggcaataagattcaattttctattgtcagc
gatgcggaggcttttgaagctggtttggtagaagcatattatccagaagcttttacggaa
gatttgtgccagagtgcaggcttcaaggctctttttcagccattagaggtggcttataga
gatggtgttttgtggataaaaggtcctgaaaccattgacacagatcattttcggaagaat
catctgccaaatcttgtggagcaatacaagcgatttggttttggtaatcttgcggtggac
attcaaatctgtcaggaaatgacgcagcaacaagcggagattttccatgcgcaaaatgaa
gaaatttaccagcaggctaatgaagaaaacttggcggcccttgaacaactggctcaaatg
gcgccaccaccagaggcagctcagccatttgtcccagaatataagaaaaatcgtcctgcc
aaagtcaatattgaaaaggctgagattacgcctatgattgaggtggatagcgaggagaat
cggattgtctttgagggtcttgtctttgaggtggagcagaagacgaccaagacggggcgg
gtcattatcaactttaagatgaccgactatacttcgtccttcaccttgcagaagtgggct
aagaatgaggaagaggcccagaagtttgatatggtcaaaaagggcaactggctacgggta
cgtggaaatgtggagaccaataatttcactcgtgatttgactatgaacgtacaggaagtc
caagaggtcaagaaggaaattcgcaaagatctcatgcctgaaggggagaaacgggtcgag
tttcatgcccataccaacatgtccactatggatgccctgcctgccgttgaggacttggtg
gcgcgtgcggcagcctggggacacaaggcggtggccattaccgaccacggcaatgtccag
tccttcccccatggctatcatgctgcccgtaaagctgggattaagccactcttcgggatg
gaggctaatattgtcgaggactctgtgcccattgcttacaacgaagcagatgtagtcctg
tctgatgccacctatgtggtctttgacgtggaaacaaccggtctctctgcagtcaacaat
gccctgattcagattgcggcgtctaagatgcacaagggcaatatcattgcagaatttgat
gagtttatcgatccaggtcatccgctcagtcaatttacaacagatctgacaggaatcaca
gatgagcatgtgcgtggttctaaacctctagaacaagtcctgcgtgagtttcaagatttc
tgtcaagattccgtcatggttgcccacaacgcgacctttgacgttggctttatgaatgtc
aactatgaacgagcaggcttacctattattagccagcctgtcattgataccttggaattt
gctcgtaacctttaccccgactttaagcgtcatggtttaggtcctctcaccaagcggttt
ggtgttgctcttgaacaccaccacatggccaactacgatgcggaggcgacagggcgcctg
ctcttcatcttcctaaaagatgccttggagaagcacaatttgaccaatctcaaccagcta
aatacggagctgattgcggaggattcctataagaaggctcgtgtcaagcatgccacgctc
tatgtgattaatcaggttggtttgaaaaatatgttcaaactggtctctctttccaatacc
aagtattttgagggagttccacgtattccacggaccgttctcaatgcccatcgtgaaggt
ttaatattgggaacagcctgtcaagagggcgaggtcttcgatgacttgctctccaaaggg
atagatgaagcggttaaaacggcagcctattatgattttatcgaagttatgccacctgcc
ctctatgctcccatgattgccaaggagcagtttaaggatatggcagagattgaagagact
atcaagcagttgattgaggtagggcgtagggcaggtctgcctgttctagcgactggaaat
gtccactacattgacccagaagaggaaatctatcgggaaatcatagttcgtgctctaggt
caaggggcaccgattaactggaccatcggaaatggtgagaatgcccaaccagctccactg
cctaaggctcactttagaacgaccagcgagatgttggacgagtttgcattcttgggagaa
agtttggcccgtgagattgtcattaccaatcccaatgccatgctggaccggtttgaagat
gttcaggtggttaagaccgacctttatacgccttatattgagaaggccgaggaaacagtt
gcggaattgacctatcagaaagcctttgaaatttatggcaatcctcttccagatattatc
gacctgcggattgagaaggaattgacgtccattctgggtaatggattcgccgtgatttac
ctggcatcgcagatgttggtgcaccgttccaacgagcggggctacctggtgggttcacgg
gggtctgtcggctccagtttcgttgcgaccatgattgggattaccgaagtaaaccctatg
cctcctcactatgtctgtccaaattgtcaacacagtgaatttatcacagatggttcctat
ggttcaggttttgacctgccagacaaggattgtgaaaagtgtgggactaagtataaaaaa
gatggacaggacattcctttcgagaccttccttggtttcgatggagacaaggttcccgat
attgacttgaacttctcaggggatgaccaaccgtctgcccatttggatgttcgagatatt
tttggtgaagaaaatgccttccgtgcaggaacggttggtacggtggcggccaagacggcc
tatggttttgtccgaggctatgagcgggattatggcaaattctaccgtgatgtagaagta
gaacgcctggctgctggtgctgctggtgtcaaacggacgactggtcagcacccaggagga
attatcgtattccctgactacatggatgtctatgactttacgcctgtccaatatcctgcc
gatgatgtgacagccagctggcagaccacccactttaacttccacgatattgatgaaaac
gtcttgaaactcgatattctgggacacgatgatccaaccatggttcgcaagttgcaggac
ttgtcaggcatcgatccgcaaactattcctgctgatgataagggggttatggctctcttt
tctggtacggaaattctgggtgttaccccagagcagattgggacaccgacaggtatgctg
ggtattcctgaatttggaaccaactttgtacgggggatggtggaggaaaccaaaccgacc
actttttcggaactcttgcagttatctggtctatcccacggtacagacgtttggttgggc
aatgcccaggacttgattaaggcaggaattgctaatctatctactgttatcggttgtcgg
gatgacatcatggtttacctcatgcacgcaggtttgccacctaagatggcctttaatatc
atggagcgggtgcggaagggcttgtggctcaagatttctgaggaagagcgaaatggctac
attcaagccatgaaggataacaaggtgccagactggtacatcgaatcctgtggaaaaatc
aagtacatgttccctaaagcccacgcggctgcctacgttatgatggccttgcgggttgcc
tatttcaaggttcatcacccgctttactactattgtgcttatttctctattcgtgccaag
gcctttgatttggcgaccatgtcaggcggtctagataaagtcaaggccaagatggaagaa
atcgccctcaagaagaaaaacaatgaagcttcgaacgttgagcaggatctctataccaca
cttgagttggtaaatgaaatgctggaacgtggcttcaagttcgggaaattggacctttac
aagtcccatgcgaccgatttcttgattgaagatgataccctcatcccaccatttgttgcc
atggatggcctgggagagaacgttgccaagcaggttgtggcggcgcgtgccgaaggagaa
tttctctccaagacagaactccgtaaacgtggtggattgtcaggtacgcttgttgaaaaa
atggatgaaatgggcatcctcggtaaaatgccagaggataaccagttgagtctctttgat
gatttgttttaa
DBGET
integrated database retrieval system
