Shinella sumterensis: Q9314_00555
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Entry
Q9314_00555 CDS
T09417
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00010
Glycolysis / Gluconeogenesis
ssum00020
Citrate cycle (TCA cycle)
ssum00260
Glycine, serine and threonine metabolism
ssum00280
Valine, leucine and isoleucine degradation
ssum00310
Lysine degradation
ssum00380
Tryptophan metabolism
ssum00620
Pyruvate metabolism
ssum00630
Glyoxylate and dicarboxylate metabolism
ssum00640
Propanoate metabolism
ssum00670
One carbon pool by folate
ssum00785
Lipoic acid metabolism
ssum01100
Metabolic pathways
ssum01110
Biosynthesis of secondary metabolites
ssum01120
Microbial metabolism in diverse environments
ssum01200
Carbon metabolism
ssum01210
2-Oxocarboxylic acid metabolism
ssum01240
Biosynthesis of cofactors
Module
ssum_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssum_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssum_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ssum_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Q9314_00555 (lpdA)
00020 Citrate cycle (TCA cycle)
Q9314_00555 (lpdA)
00620 Pyruvate metabolism
Q9314_00555 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
Q9314_00555 (lpdA)
00640 Propanoate metabolism
Q9314_00555 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Q9314_00555 (lpdA)
00280 Valine, leucine and isoleucine degradation
Q9314_00555 (lpdA)
00310 Lysine degradation
Q9314_00555 (lpdA)
00380 Tryptophan metabolism
Q9314_00555 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Q9314_00555 (lpdA)
00670 One carbon pool by folate
Q9314_00555 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssum04147
]
Q9314_00555 (lpdA)
Enzymes [BR:
ssum01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Q9314_00555 (lpdA)
Exosome [BR:
ssum04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Q9314_00555 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
FAD_binding_3
HI0933_like
GIDA
NAD_binding_8
DAO
Lys_Orn_oxgnase
Amino_oxidase
Thi4
AlaDh_PNT_C
2-Hacid_dh_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WLS08312
LinkDB
All DBs
Position
108639..110084
Genome browser
AA seq
481 aa
AA seq
DB search
MSNAYDVIVIGSGPGGYIAAIRAAQLGLKTAIVEREHLAGICSNWGCIPTKALLRSAEIF
HYAQHPGDYGVKIEGKVTPDLPAIVARSRGIAQRMNGGVGFLMKKNKVDIIWGEAKVTKP
GEIVVSKTTKAIQQPQAPLPKNVLPEGTYTAKNIVIATGARPRALPGIEPDGKLIWTYFE
AMKPAEMPKSLLVMGSGAIGIEFASFYRTLGVDVTVVEVMKTVMPVEDAEISALAKKQFE
KQGMKIHLEAKVTKVEKGANSITAHVEMKDGKVETITADRMISAVGVQANIENIGLEALG
VKTDRGFIAIDGYGKTNVPGIYAIGDVAGPPMLAHKAEHEAVICIEKIAGLPNVHPMDKS
KIPGCTYCHPQVASVGLTEAKAKEQGRDIRVGRFPFVANGKAIALGEDQGLVKTIFDKKT
GELLGAHLVGAEVTELIQGFVIAMNLETTEEELMHTIFPHPTISETLKESVLDAYGRALN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgcttacgacgtcatcgttatcggttcgggcccgggcggctatattgccgcg
atccgcgccgcccagctcggcctgaagacggccatcgtggagcgcgagcatctcgccggc
atctgctccaactggggctgcatcccgaccaaggcgctgctgcgctcggccgagatcttc
cactatgcccagcatccgggcgactatggcgtgaagatcgaaggcaaggtgacgccggac
ctgccggccatcgtcgcgcgctcgcgcggcatcgctcaacgcatgaacggcggcgtcggc
ttcctgatgaagaagaacaaggtcgacatcatctggggcgaggcgaaagtcaccaagccc
ggcgagatcgtcgtttccaagacgaccaaggccatccagcagccgcaggccccgctgccg
aagaacgtgctgcccgagggcacctataccgccaagaatatcgtcatcgccaccggtgca
cgcccgcgcgcgctgccgggcatcgagcccgacggcaagctgatctggacctatttcgag
gcgatgaagcccgcggaaatgccgaaatcgctgctcgtcatgggctcgggcgccatcggc
atcgaattcgcttcgttctatcgcacgctcggcgtggatgtgaccgtcgtcgaggtgatg
aagacggtgatgccggtcgaggacgcagaaatctccgcgcttgccaagaagcagttcgaa
aagcagggcatgaagatccatctggaggccaaggtcaccaaggtggagaagggtgccaac
tccatcactgcgcatgtcgagatgaaggacggcaaggtcgagacgatcacggccgaccgc
atgatctccgccgtcggcgtgcaggccaatatcgagaatatcggcctggaggcgctgggc
gtgaagaccgaccgcggcttcatcgccatcgacggctacggcaagaccaacgtgcccggc
atctacgccatcggcgacgttgcgggtcccccgatgcttgcccacaaggcggagcatgag
gccgtcatctgcatcgagaagatcgcaggtcttccgaatgtgcatccgatggacaagtcc
aagatcccgggctgcacctattgccacccgcaggtcgcctccgtcggcctgacggaagcg
aaggccaaggagcagggccgcgacatccgcgtcggccgcttccccttcgtcgccaacggc
aaggcgatcgcgctcggcgaagaccagggtctcgtcaagacgatcttcgacaagaagacc
ggcgaactgctgggcgcccatctcgtgggcgcggaagtgacggaactgatccagggcttc
gtcatcgccatgaacctcgagacgacggaggaagagctgatgcacacgatcttcccgcat
ccgacgatttccgaaaccttgaaggaaagcgtgctggatgcctatgggcgtgcgctgaac
gcttga
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