KEGG   Shinella sumterensis: Q9314_00855
Entry
Q9314_00855       CDS       T09417                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
ssum  Shinella sumterensis
Pathway
ssum00230  Purine metabolism
ssum00240  Pyrimidine metabolism
ssum01100  Metabolic pathways
ssum01232  Nucleotide metabolism
Module
ssum_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ssum_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ssum00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Q9314_00855
   00240 Pyrimidine metabolism
    Q9314_00855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssum03400]
    Q9314_00855
Enzymes [BR:ssum01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Q9314_00855
DNA repair and recombination proteins [BR:ssum03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Q9314_00855
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: WLS08365
LinkDB
Position
complement(169119..172937)
AA seq 1272 aa
MRIERRFTKPGQSAYADIAFRKATSEIKNPDGSIVFRLADIDVPQQFSQVAADILAQKYF
RKAGVPARLKKVEENDVPSFLWRSVPDTEALKALPEGERFGSETDARQVFDRLAGTWTYW
GWKGKYFATEEDAAAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNENGIMDLWVREARLFKYGSGTGSNFSHLRG
EGEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEAYINWKVKE
EQKVAALVTGSKIVAGHLKAIMKACVNCSAEGDRCYDPAENPALKREIRAAKKSQVPENY
IKRVIQFARQGYKDLEFTTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGDWNLT
ARKDGKVMKTLKARDLWEQISYAAWASADPGLHFNTTMNDWHTSPAAGPIRASNPCSEYM
FLDDTACNLASLNLLQFKDAVTKNINIADYEHAVRLWTIVLEVSVMMAQFPSRQIAERSY
EYRTLGLGYANIGGLLMSSGIPYDSTEGRAIAGALTAIMTGVSYATSAEMASELGPFPNF
EPNRDNMLRVMRNHRRAAYGETTGYEQLSVNPVALVHDECPDQTLIVHAKAAWDKAVELG
ERHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALR
TLGYSESQIAEIEAYAVGHGNLNQAPAVNPGSLKAKGFTDEKIEAVSAGLKAAFDIKFAF
NQWTLGADFLKETLKVSDEQLADMSFNLLEHIGFTKKEIEAANIHVCGAMTLEGAPFLKP
EHLAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAYM
LSWKLALKANALYRDGSKLSQPLNASLIEDEDNEDDAVEALVAAPAAAQAVTVTEKIVEK
IIERVVRDREKLPNRRQGYTQKAVVGGHKVYLRTGEFGDGRLGEIFIDMHKEGAAFRAMM
NNFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYL
GRHDLAHVDQSDFSNTALGKGIQEGKTNPFSTGWTRGHKPTLIQGGQSGERQLAEPKGAA
TAAPAKAAVAGNVTAFAGSAARKIEPTVAISTNEIVAFKRDYEERAAELAEEIAEEVAGE
AEQSVTALFSDKAAAEAASAKADAKKLEAERRMRSIAQGYTGNMCSECQNFTMVRNGTCE
KCDTCGATSGCS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgcgtatagaacgtcgtttcaccaaacctggccagtcggcctatgcggacatcgcgttc
cgcaaggccacaagcgagatcaagaacccggacggttccatcgtcttccggctggccgat
atcgatgtgccccagcagttcagccaggtcgcagccgacatcctggcccagaagtacttc
cgcaaggcgggcgtgcccgcgcggctgaagaaggtcgaagaaaacgacgttccgtcgttc
ctgtggcgctccgtgccggataccgaagccttgaaggcgctccccgagggtgagcgcttc
ggttcggaaaccgatgcccgccaggtcttcgaccgtctcgccggcacctggacctactgg
ggctggaagggcaagtatttcgcgaccgaggaagatgccgccgccttcaaggacgagctc
gcctacatgctcgccacccagcgcgtcgcaccgaattcgccgcagtggttcaacaccggc
ctgcactgggcctacggcatcgatggccccggccagggccatttctatgtcgatcccttc
accggcaagctgaccaagtccaagtcggcttacgagcatccccagccgcatgcctgcttc
atccagtccgtcgaggacgatctcgtcaacgagaacggcatcatggacctgtgggtgcgt
gaagcccgcctgttcaaatacggctccggtaccggctcgaacttctcgcatctgcgcggc
gaaggcgaaaagctgtccggcggtggtcgctcctccggcctgatgagcttcctgaagatc
ggcgaccgcgcggcgggcgccatcaagtcgggcggtacgacgcgccgtgcggccaagatg
gtcgtggtcgatatcgaccacccggacatcgaggcctacatcaactggaaggtcaaggaa
gagcagaaggtggcggcgctcgtcaccggctcgaagatcgtcgccggccacctcaaggcc
atcatgaaggcctgcgtcaactgctcggccgaaggcgaccggtgctatgacccggcggaa
aacccggcgctgaagcgcgaaatccgcgcggccaagaagtcccaggttccggaaaactac
atcaagcgcgtcatccagttcgcgcgccagggctacaaggacctcgagttcaccacctat
gacacggactgggattcggaggcgtacctcaccgtttccggccagaactccaacaactcc
gtctccttgaaggacgacttcctgcgcgccgtcgagaacgatggcgactggaacctgacc
gcccgcaaggacggcaaggtcatgaagacgctgaaggcccgcgacctctgggagcagatc
tcctacgccgcctgggcatcggccgatccgggcctgcacttcaacacgacgatgaacgac
tggcacacctcgccggccgcgggccccatccgtgcctcgaacccgtgctcggagtacatg
ttcctcgacgataccgcctgcaacctcgcctcgctgaacctgcttcagttcaaggatgcg
gtgaccaagaacatcaacatcgccgactatgagcacgccgtccgcctctggaccatcgtg
ctggaagtctcggtgatgatggcgcagttcccctcgcgccagatcgccgaacgctcctat
gaataccgcacgctcggcctcggctacgccaatatcggcggcctgctgatgtcctcgggc
attccctatgactcgacggaaggccgcgccattgccggtgcgctgaccgcgatcatgacc
ggtgtgtcctatgcgacctccgccgagatggcgagcgaactcggtccgttcccgaacttc
gagccgaaccgcgacaacatgctgcgcgtcatgcgcaaccaccgccgcgccgcctatggc
gagaccaccggctacgagcaactgtcggtcaatccagttgccctcgttcatgacgagtgc
ccggaccagacgctgatcgtccatgccaaggctgcctgggacaaggccgtggaactcggc
gaaaggcacggctaccgcaacgcccagacgaccgtgattgcgccgaccggcacgatcggc
ctcgtcatggactgcgacacgaccggcatcgagcccgacttcgcgctcgtcaagttcaag
aagctcgccggcggcggctacttcaagatcatcaaccgcgccgttcccgaagccctgcgt
acgctcggttattcggaaagccagatcgccgaaatcgaggcctatgccgtcggccacggc
aacctgaaccaggcgccggcggtcaaccccggctcgctgaaggcaaagggcttcaccgac
gagaagatcgaggcggtcagcgccggtctcaaggcggccttcgacatcaagttcgccttc
aaccagtggacgctgggtgccgacttcctgaaggagacgctgaaggtttccgacgagcag
ctcgccgacatgtccttcaaccttctggagcatatcggcttcacgaagaaggaaatcgaa
gccgccaacatccatgtctgcggtgcgatgacgctggaaggcgcacccttcctgaagccc
gagcacctggcggtgttcgattgcgccaatccctgcggcaagatcggcaagcgttacctt
tcggtcgaaagccacattcgcatgatggccgccgcccagccgttcatttcgggcgccatt
tccaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaacgcctacatg
ctctcctggaagcttgcgctgaaggccaacgccctctaccgcgacggttccaagctctcg
cagccgctcaatgcctcgctgatcgaggatgaggacaacgaggacgacgccgtcgaggcg
ctggtcgcagctcccgctgccgcccaggccgtcacggtcaccgaaaagatcgtggagaag
atcatcgagcgcgtcgtgcgcgaccgtgaaaagctgccgaaccgccgccagggctacacc
cagaaggccgtcgtcggcgggcacaaggtctatctgcgcaccggcgaattcggtgacggc
cgcctcggcgagatcttcatcgacatgcacaaggaaggcgccgccttccgtgcgatgatg
aacaacttcgccatcgccatctcgctgggcctccagtacggcgtgccgctcgaggaatat
gtggaggccttcaccttcaccaagttcgagcccgccggcatggtccagggcaacgatgcg
atcaagaacgcgacgtcgatcctcgactacgtgttccgcgaactcgccgtctcctatctc
ggccgccatgacctcgcgcatgtcgaccagtcggacttctccaacaccgccctcggcaag
ggcattcaggaaggcaagacaaacccgttctcgaccggctggacgcgcggccacaagccg
acgctcatccagggcggccagtcgggcgaacgtcagctcgccgagcccaagggtgcggcc
actgccgctccggcaaaggcggccgtggccggcaacgtgacggctttcgccggcagcgcc
gcccgcaagatcgagccgacggttgcgatctccaccaacgaaatcgtcgccttcaagcgc
gattacgaggagcgcgcggccgaactggccgaggagatcgcggaagaggtcgccggagaa
gccgaacagagcgtgactgccctcttttccgacaaggcagcagccgaagcggcttccgcc
aaagcggacgccaagaagctcgaagccgagcgccgcatgcgctcgattgcccagggctat
accggcaacatgtgctcggagtgccagaacttcaccatggtgcgcaacggcacctgcgag
aagtgcgacacctgcggcgcaacgagcggctgctcttga

DBGET integrated database retrieval system