Shinella sumterensis: Q9314_01125
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Entry
Q9314_01125 CDS
T09417
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssum
Shinella sumterensis
Pathway
ssum03410
Base excision repair
ssum03430
Mismatch repair
ssum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q9314_01125 (recJ)
03430 Mismatch repair
Q9314_01125 (recJ)
03440 Homologous recombination
Q9314_01125 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssum03400
]
Q9314_01125 (recJ)
DNA repair and recombination proteins [BR:
ssum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Q9314_01125 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q9314_01125 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q9314_01125 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WLS08412
LinkDB
All DBs
Position
complement(222705..224513)
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AA seq
602 aa
AA seq
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MSMLENADPVPRAFLGVERSATGQRWMARLDQAGENRALAMSQTHGLPDLISRVLAGRGV
PFENALEFLDPTLRRLMPEPYSLMDCEAATERLARAIANRERVAIFGDYDVDGASSSALL
YRFLAHFGVEAEIYIPDRIFEGYGPNPAAIGQLIERGAQLIVTVDCGSTSHESLAVARER
GVDVVVIDHHQVGVDLPPALALVNPNREDDLSGQGHLSAAGVVFLVLVALQRLLRTRGDA
RAGTIDLLSMLDIVALSTVCDVVPLKGLNRAYVVKGLVAARHLGNAGLTALLKQAGIGGP
VTPYHLGFLVGPRINAGGRIGDAALGSRLLTMEEPGEAERIARQLDELNRERQAMEAAML
AEAEAEAQAEYGTGENASVIITAREGWHPGVVGLLASRLKDRFRRPAFAIAFDPSGKGTG
SGRSISGFDLGRMVRAAVDEGILVKGGGHAMAAGLTVERANLGRLRSFFEERAERVVRDL
VAVETLKIDGALSASGATLALADQLEQAGPYGSGHPQPIFALPAHRVRDVRPVGANHLRV
SLEGPDGGRLDAMAFRAAEADLGLFLMKERGQAVHFAGTLSADSWQGNRRIQFRILDAAK
AF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttggaaaacgccgatcccgtcccccgcgcctttctcggcgtcgagcgctcc
gcgaccgggcagcgctggatggcgcggctcgatcaggcgggagagaaccgcgcgctggcg
atgagccagacccacgggctgcccgacctgatttcccgggtgcttgccgggcggggcgtg
ccgttcgaaaacgcgctcgaatttctggatccgacattgcgccggctgatgccggaaccc
tacagcctgatggactgcgaagcggccaccgagcggctggcgcgcgctatcgcaaaccgc
gagcgcgtggccatcttcggcgattacgatgtcgacggcgcatcgtcatccgcactgctt
tatcgtttcctcgcgcatttcggcgtcgaggccgaaatctacattcccgaccggatcttc
gaaggctatgggcccaatccggcggcgatcggccagttgatcgagcgcggtgcgcaactg
atcgtcacggttgattgcggctccaccagccacgaatcgcttgccgtggcgcgcgaacgc
ggcgttgatgtcgtggtgatcgatcaccatcaggtcggcgtggacctgccgcccgcgctt
gccctggtcaatccgaaccgtgaggacgatctttcggggcaggggcatctgtcggccgcc
ggcgtcgtgttcctcgtgctggtggccctgcaacggctcctgcgcacgcgcggcgatgcc
cgagccgggacgatcgatctcctgtccatgctcgatatcgtcgcgctgtcgacggtgtgc
gatgtcgtgccgctcaagggcctgaaccgcgcctatgtcgtaaaaggcctcgtcgccgcc
cgtcatctcggcaatgcgggattgacggcgttgctcaagcaggcaggcatcggcggcccc
gtgacgccctatcacctcggcttcctcgtcgggccgcgcatcaatgccggcgggcgcatc
ggcgacgcggcgctcggcagccggcttctcaccatggaagagcccggagaggccgagcgc
atcgcccggcaactggacgaactcaaccgcgagcgccaggcgatggaggcggccatgctg
gcggaggcggaagccgaggcgcaggcggaatacggcacaggcgagaacgcttccgtcatc
atcacggcccgcgagggctggcatcccggcgtcgtcggcctgctggcctcccgtctcaag
gatcgtttccggcggccggcctttgccatcgccttcgacccgtccggcaagggcaccggc
tcgggccgctcgatcagcgggttcgatctcggccgcatggtgcgtgccgcggtggacgaa
ggcattctcgtcaagggtggcggccatgccatggcggccggcctcacggtggaacgcgcc
aacctcggccggctgcgcagcttcttcgaggagcgcgccgagcgtgtcgtgcgcgacctc
gtggcggtggaaacgttgaagatcgacggggcgctcagcgccagcggtgcgacgctcgcg
cttgccgatcagcttgagcaggcgggcccctatggttccggccatccgcagccgatcttc
gccttgccggcgcaccgtgtgcgcgatgtgcggcccgtgggtgccaaccacctgcgcgtc
agcctggaagggccggacggtggccgtctcgacgccatggcgtttcgcgcggccgaagcc
gatctcggcctcttcctgatgaaggaacgcggtcaggcggtgcatttcgccggtacgctt
tccgccgacagctggcagggcaacaggcgcatacagtttcgcattctcgatgcggcaaag
gcattctga
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