KEGG   Shinella sumterensis: Q9314_01250
Entry
Q9314_01250       CDS       T09417                                 
Symbol
trbJ
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
ssum  Shinella sumterensis
Pathway
ssum02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssum00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Q9314_01250 (trbJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssum02044]
    Q9314_01250 (trbJ)
Secretion system [BR:ssum02044]
 Type IV secretion system
  Trb secretion system protein
   Q9314_01250 (trbJ)
SSDB
Motif
Pfam: DUF4141 Mod_r DUF948 Hypoth_Ymh ALIX_LYPXL_bnd DUF5929
Other DBs
NCBI-ProteinID: WLS08434
LinkDB
Position
complement(243116..243889)
AA seq 257 aa
MTIRLFRSRAIVMAATMLAAPLAVSSMLATPAHAQFGRIVFDPSNYAQNILTAARTLEQI
NHQITSLQNEATMLMNQARNLASLPFSSLQQLQQNVQRTQQLLSQAQNIAFDVQRIDQAF
QQQYGNVSMSATDQQLVANARTRWQNTVGGLQDAMRVQAGVVGNIDSNRTQMSELVGQSQ
NATGALQATQAGNQLLALQSQQLSDLVALLAANGRAGALTEAERAAAAEQGREQRRRFLT
PGNGYQPGSAQMFNNGN
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaccattcgtcttttccgctcgcgcgccatcgtcatggccgcaacgatgctcgccgca
ccgctggccgtttcgtccatgctggcaacgccggcacatgcgcaattcggaaggatcgtc
ttcgacccgtcgaactatgcgcaaaacatcctcacggccgcgcgcacgctggagcagatt
aatcatcagatcacctcgctccagaacgaagcgaccatgttgatgaaccaggcgcgcaat
ctggcgagcctgccgttctcgtcgctccagcagcttcaacagaacgtccagcgcacgcag
cagcttttgagccaggcgcagaacatcgccttcgacgtgcagcgcatcgaccaggcgttc
cagcagcaatacggcaacgtgtcgatgtcggcgacggatcagcagctcgtcgccaacgct
cgcacgcgctggcagaacaccgtaggcggcttgcaggacgccatgcgcgttcaggccggc
gtcgtcggcaacatcgacagcaaccgcacgcagatgtcggagctggtcggccagagccag
aacgcgaccggcgcgctccaggcgacgcaagccggcaaccagcttctagccctccagtcg
cagcagctttccgaccttgttgcgttgctcgcagccaacggccgggcgggcgcgctgacc
gaggccgaacgcgcagcggcagcagaacaggggcgcgagcagcgccgccgcttcctcacg
cccggcaacggctaccagcccggcagcgcgcaaatgttcaacaacggcaattga

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