Shinella sumterensis: Q9314_02085
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Entry
Q9314_02085 CDS
T09417
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
Organism
ssum
Shinella sumterensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
WLS08595
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Position
complement(408398..409957)
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AA seq
519 aa
AA seq
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MRQSVSPSFGRTATRLIAAALLASVATGCSSDASRFGGLFSSSGQDNMTTSSVPRRTLFG
SNSVVPRGTVGNGQEQFASANQMGTRDQALNQPFPDQGGVSYDPINTSTTTGSGSRLATT
PMTVQRGSLSDPTDGGIRPAERETFGGQRQAKAVADNTDTLSTGTVQKAKAGWSTNNAPV
VMLRQGESVKTLANRYGVPEKEILAANGLKRSTDAEPGQRIIIPTFSTTASAAKAATDHT
LKVDNKLPTPERKTEQNVAILPGTSKRDKVKSEADQANTNLANAGEGTGGYEVKPGDSLA
KIARSNGVSVDALKKANGIDTAAIRIGQKLVIPAGGAAVETTTDKTTTASVPVKEKKVET
AEKKPESYKAPVKTVSVAEVTQKSDVTDEAPESTGIGKYRWPVRGAVIAGYGSNVNGSRN
DGIDISVPEGTPIKAAENGVVIYAGSSLKELGNAVLVRHDDGTVTVYGHAGDLNVQRGQK
IQRGQTVATSGMSGSATRPKVHFEVRKNATPVNPMTYLE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagagtgtatcgccgagttttggcaggaccgcgacccgccttattgcagcagcc
ctgctggccagtgtcgcaaccgggtgcagctcggatgcgtcccgttttggcggtctgttt
tccagctccgggcaggacaacatgacgaccagttcggttccgcgccgcacgctgtttggc
agcaacagcgtcgtgcctcgcggaacggtcggcaacggtcaggaacagttcgcatcggca
aatcagatgggaacccgtgatcaggcgctcaaccagcccttcccggatcagggtggcgtt
tcctacgatcccatcaacacatcaacgacgaccggctcgggttcgcgtctggcgacgaca
ccgatgaccgttcagcgcggttcgctcagcgaccccacggatggcggcatccggccggcc
gagcgcgagaccttcggtgggcagcgccaggcaaaagcggtcgccgacaatacggatacg
ctctcgaccggaaccgtgcagaaggccaaggccggctggtcgaccaacaatgccccggtc
gtcatgctgcgccagggcgaaagcgtgaagacgctcgccaaccgttatggcgtgccggag
aaggaaatccttgccgcaaacggactgaagcgttcgaccgacgccgagcccggccagcgg
attatcatcccgaccttcagcacgacggcaagcgctgccaaggccgcgacggaccacacg
ctgaaggtcgacaacaagctgccgacgcccgagcgcaagacggaacagaacgttgccatc
ctgcccggcacgtcgaagcgcgacaaggtgaagtccgaagccgatcaggccaacaccaac
ctcgccaatgccggcgaaggcacaggcggctatgaggtcaagcccggcgattcgctcgcc
aagatcgcccgcagcaacggcgtgtcggtcgacgccctgaagaaggcgaacggcatcgat
accgccgcgatccgcatcggccagaagctggtgatcccggcgggcggcgcggccgtcgag
acgacgacggacaagacgacgacggcctccgttccggtcaaggaaaagaaggtcgagacg
gcggagaagaagccggagtcctataaggcgccggtcaagaccgtctcggtcgccgaggtg
acgcagaagtccgacgtgacggacgaagcgcccgaatcgactggcatcggcaagtatcgc
tggccggttcgcggcgcggtcattgccggctatggctccaacgtcaacggcagccgcaac
gacggtatcgatatctcggtgcccgagggcacgcccatcaaggcggctgagaatggcgtg
gtcatctacgccggcagcagcctgaaggaactcggcaacgcggttctcgtccgccacgac
gacggcaccgttaccgtctacggccatgccggcgacctcaacgtgcagcgcggccagaag
atccagcgcggccagaccgtcgcgacctcgggcatgagcggcagcgccacccggccgaag
gttcacttcgaggtgcgcaagaacgcgaccccggtcaacccgatgacctatctggaatag
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