Shinella sumterensis: Q9314_02250
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Entry
Q9314_02250 CDS
T09417
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssum03009
]
Q9314_02250
Enzymes [BR:
ssum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Q9314_02250
Ribosome biogenesis [BR:
ssum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q9314_02250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WLS08625
LinkDB
All DBs
Position
complement(441686..442678)
Genome browser
AA seq
330 aa
AA seq
DB search
MAGIEHKQVENDEAGMRLDRWFKVHYPGLGFGPLQKLLRSGQVRIDGGRAKSDTRVQPGQ
MIRIPPMDVDPKAVKSGPIAGRDLKHSPDGELLSRMLLHEDDKVFVLNKPAGIAVQGGSG
VTRHIDQMLEAWTSQKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKKTYW
SLVKGVPKKREDKISTWLVKEQTPDGDRMRIARHGEDGADHAVSFYRVVEQAGQNFAWLE
MEPYTGRTHQLRVHALHIGHPILGDPKYFDADVNWNFPGGVQNRLHLHARHIDIPHPNGG
RLRVTAPLPPHMVQTWNLFGFDQNTADEEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatcgaacacaagcaggtggagaacgacgaggcgggcatgcgcctcgaccgg
tggttcaaggtccactatccggggctgggcttcggtccgctccagaaattgctgcgctcc
gggcaggtccgcatcgatggcgggcgcgcgaaaagcgatacgcgcgtgcagcccggacag
atgatccgcattccgcccatggatgtcgatccgaaggccgtgaaatccgggccgattgcc
gggcgcgacctcaagcattccccggacggcgaactcctgtcgcgcatgctgctgcacgag
gacgacaaggtgttcgtgctcaacaagcctgccggcatcgccgtacagggcggctcgggc
gtcacgcgtcatatcgaccagatgctggaagcctggacgagccagaagggcgagaagccg
cgcctcgtgcaccgcctcgaccgcgacacctcgggcgttctcgtcatcgcccgcacgcgc
ggtgccgcgcagaagctcacggctgcgtttcgcgagcgcgacaccaagaagacctactgg
tcgctggtcaagggcgtgccgaagaagcgcgaggacaagatttccacctggctcgtcaag
gagcagacaccggatggcgatcgcatgcgcattgccaggcatggcgaggatggtgcagac
cacgccgtctctttctaccgcgtcgtcgagcaggcggggcagaattttgcgtggctggag
atggagccctataccggccgcacgcaccagctgcgcgtccacgctctgcacatcggccac
cccattctcggcgaccccaagtatttcgatgcggacgtgaactggaatttcccgggcggg
gtgcagaaccggctgcatctgcatgcgcgtcacatcgacattccccatcccaatggcggg
cgcctgcgtgtgacggcgcctctgcccccgcacatggtgcagacgtggaacctcttcggt
ttcgatcagaatacggcggatgaggaagagtga
DBGET
integrated database retrieval system
