Shinella sumterensis: Q9314_02560
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Entry
Q9314_02560 CDS
T09417
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_02560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_02560
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_02560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WLS08686
UniProt:
A0AA50D5C7
LinkDB
All DBs
Position
complement(492185..493021)
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AA seq
278 aa
AA seq
DB search
MKRMSRFILGLVVTMVGLFLLLPILVIIPLSFNPEPYFSFTGKMLQLDPNGWSLRWYREV
VQDPQWRLAFKNSITVAAIVTPIATALGTCAALGLRHLPPTQRTVVTLFVSAPLIVPIII
VAAGTYLLFAPLGLTQSLTGIVLSHISLAAPFVVITVSGALTTFDERLLRAAAILGASPV
RAFCRVTLPIMAPGVAAGALFAFATSFDEAVLTLFLAGYDQRTIPLQMWSGVRDQLSPAV
LVVASLLVAAVSIVMVGLSLHQALSRQRSKQLGYGAEH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatgtcccgttttatcctcgggctggtcgtaacgatggtgggcttgttcctt
ctcctacccatcctcgtgatcataccgctctccttcaatccagagccgtacttctcgttc
acgggaaagatgcttcaactcgatcctaatggatggtcgcttcgctggtacagggaagtc
gtgcaagatccacaatggcgtctggcattcaaaaacagcatcacggtggccgcgatcgta
acaccgatcgccaccgcgctcggaacctgtgcggcgctcggtttgcggcatttaccaccc
acgcagcgtaccgttgtgacccttttcgtgagcgcgccgctgatcgtgccgattatcatc
gtcgcggcgggaacatatctgctgttcgcgcctctcgggctaacgcaatcgttgacaggg
atcgtcctatcccacatctcgctggctgctcccttcgtcgtcatcaccgttagcggcgcg
ctgacgacgttcgatgaacgtctgcttcgggccgccgcgatcctcggcgcatcgccggtc
cgcgccttttgccgtgtaaccttgcccatcatggccccaggcgtggccgcgggagcgctc
tttgccttcgcgacctctttcgacgaggcggtcctgacattgtttctcgccggttatgac
cagcggacgataccgcttcaaatgtggtcgggggtacgggaccagttgagtcctgccgtt
ctcgtcgtggcgagcctgctcgtcgccgcagtttccatcgtcatggtcgggttgagcctc
caccaggcgctatcccgtcagaggagcaaacaacttggctatggtgctgaacattga
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