Shinella sumterensis: Q9314_04555
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Entry
Q9314_04555 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_04555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_04555
Transporters [BR:
ssum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Q9314_04555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
AAA
Zeta_toxin
RsgA_GTPase
AAA_18
ABC_ATPase
AAA_25
AAA_29
APS_kinase
AAA_33
AAA_28
AAA_24
AAA_21
MMR_HSR1
AAA_14
nSTAND3
AAA_15
Motif
Other DBs
NCBI-ProteinID:
WLS09050
LinkDB
All DBs
Position
complement(872934..874829)
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AA seq
631 aa
AA seq
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MATTTKKTVSADSSNPLRTLVNLWPYMWPSDRPDLKMRVVWASVFLLASKVVLLLVPYFF
KWATDALNGKSDVVGLLPVFMLGAVMLVLAYNGARILQAGLNQLRDALFASVGQYAVRQL
AYRTFVHLHRLSLRFHLERRTGGLSRVIERGTKGIETIVRFTILNSVPTFIEFLMTAAIF
WWGYGLQYLLVTAVTVWLYIWFTVRASDWRISIRRSMNDSDTEANTKAIDSLLNFETVKY
FGNEEMEARRFDQSMERYEKAATQVWTSLGWLNFGQALIFGVGMAAMMAMSAMAVQRGEQ
TVGDFVFINAMLIQLAIPLNFIGFVYREIRQGLTDIEQMFDLLEVEEEVQDKPGAVDLAV
SSGAISFRDVHFAYDPARPILKGVSFDVPAGKTVAVVGPSGAGKSTLSRLLYRFYDVQEG
AITIDGQDVRDVTQKSLRHVIGMVPQDTVLFNDTIAYNIRYGRPDATQEEVVAAAEAAQI
GPFIHQLPEGFKAMVGERGLKLSGGEKQRVAIARTILKSPPILILDEATSALDTRTEQEI
QAALDIVSKNRTTLVIAHRLSTVISADEIIVLKDGAIAERGTHGELMQRDDGLYASMWNR
QREAVQAEERLKQVRESDDLGIVVRGAPAAE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacgacaacgaaaaagacggtttcggccgacagcagcaatccgctccggacgctg
gtcaatctctggccctatatgtggccctccgacaggccggacctgaagatgcgagtggtc
tgggcctcggtcttcctgcttgcctccaaggtcgtgctgctgctcgtgccctatttcttc
aaatgggcgacggatgcgctgaacggcaagtcggacgtcgtgggtctgctgccggtcttc
atgcttggcgccgtcatgctggtgctcgcctataacggcgcgcgcatcctgcaggccggc
ctcaaccagctgcgcgatgcgctgtttgccagcgtcgggcaatatgcggtccgccagctg
gcctaccgcaccttcgttcacctgcaccgcctctcgctgcgcttccatctggagcggcgc
accggcggcctgtcgcgcgtcatcgagcgcggcaccaagggcatcgagacgatcgtgcgc
ttcacgatcctcaacagcgtgccgaccttcatcgaattcctcatgaccgccgccatcttc
tggtggggctacgggctgcaatatctgctcgtcaccgccgtcacggtctggctctacatc
tggttcacggtgcgcgcctccgactggcgcatctccatccgccgctcgatgaacgacagc
gacaccgaggccaacaccaaggccatcgattcgctcctgaacttcgagacggtgaagtat
ttcggcaacgaggagatggaggcccgccgcttcgatcagtccatggaacgctacgagaag
gcggcgacccaggtctggacctcgctcggctggctgaacttcggccaggcgctgatcttc
ggcgtcggcatggcggccatgatggcgatgtcggccatggccgtgcagcgcggcgagcag
acggtgggcgatttcgtcttcatcaacgccatgctcatccagctggccattccgctcaac
ttcatcggtttcgtctaccgcgaaatccgccagggcctgaccgatatcgagcagatgttc
gatctcctggaggtggaggaagaggtgcaggacaagcctggcgccgtcgacctcgccgtc
tcctccggtgccatctccttccgcgacgtgcatttcgcctacgatcccgcgcggccgatc
ctcaagggcgtttccttcgacgtgcccgccggcaagaccgtcgcggtcgtcggcccgtcg
ggtgcgggcaagtccacgctgtcgcggctgctctaccgcttctacgatgtgcaggagggc
gccatcaccatcgacgggcaggatgtccgcgacgtcacgcagaagagcctgcgccatgtc
atcggcatggtgccgcaggataccgtgctgttcaacgacacgatcgcctacaacatccgc
tatggccggccggatgcgacccaggaagaggtggtcgctgccgccgaggccgcgcagatc
ggccccttcatccatcagctgcccgagggcttcaaggcgatggtgggcgagcgcgggctg
aagctttccggcggcgagaagcagcgtgtcgccatcgcgcgcaccatcctgaagagcccg
cccatcctcatcctcgacgaggcgacctccgcactcgatacgcgcacggaacaggaaatc
caggcggcgctggacatcgtgtcgaaaaaccgcaccacgctggtcatcgcccaccgcctg
tccacggtcatctccgccgacgagatcatcgtgctgaaggacggcgcgattgccgagcgc
ggcacccatggcgaactcatgcagcgcgacgacggcctctacgcctccatgtggaaccgc
cagcgcgaggccgtccaggccgaggaacgcctcaagcaggtgcgcgaaagcgacgatctc
gggattgtcgtgcgcggtgcgccggcggcggagtga
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