Shinella sumterensis: Q9314_04715
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Entry
Q9314_04715 CDS
T09417
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ssum
Shinella sumterensis
Pathway
ssum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q9314_04715 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssum03400
]
Q9314_04715 (recO)
DNA repair and recombination proteins [BR:
ssum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q9314_04715 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q9314_04715 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WLS09079
LinkDB
All DBs
Position
complement(905066..905830)
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AA seq
254 aa
AA seq
DB search
MQWSDEAIVLGVRRHGETSVIVEVMTRGRGRHLGMVRGGRSRTMQPVLQPGNSVDVTWRA
RLDEHLGEFRIEPVELRAARLMETATAVYGVQAMAALLRFLPERDPHPHLYEALTVILDH
LHEPSAAGELLIRFELAVLNDLGFGLDLLECAATGSREDLCYVSPKSGRAVSRAAGGPWA
DRMLALPAFLGDESRHAADAAALSDGFRLTAFFLNRYVCEPRGLTLANARDGFVQAALKA
LGTAEEMRAGEAGA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggagtgatgaggccatcgttctgggcgttcggcgccatggcgaaacgtccgtt
atcgtcgaggtcatgacgcgtggccgcggccggcatctcggcatggtgcgcggcggccgc
tcgcggaccatgcagccggtgctccagccgggaaattccgtcgatgtcacctggcgcgcg
cggctcgatgagcatctcggcgaattccgcatcgagccggtggaactgcgcgcggcccgg
ctgatggaaacggcgaccgccgtctacggcgtgcaggccatggccgcactcctgcgcttc
ctgccggagcgcgatccgcatccccatctctacgaggcgctgaccgtcatcctcgatcac
ctgcacgagccctctgccgcgggcgagcttctcatccgcttcgagctcgccgtcctcaac
gatctcggcttcggcctcgatctcctggaatgcgccgccaccggctcgcgcgaggacctc
tgctacgtctcgcccaaatcgggccgcgcggtgtcgcgtgccgccggcgggccctgggcg
gacaggatgctggcgctgccggcgttcctgggtgatgaaagccgccacgccgccgatgcg
gcggccctttccgatggcttccggctcacggcctttttcctcaaccgctacgtctgcgag
ccccgcggcctgaccctcgccaacgcccgcgacggcttcgtgcaggctgcgctgaaggcg
ctggggacggcggaagagatgcgggccggggaagccggcgcgtga
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