Shinella sumterensis: Q9314_05110
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Entry
Q9314_05110 CDS
T09417
Name
(GenBank) DEAD/DEAH box helicase
Organism
ssum
Shinella sumterensis
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Paralog
GFIT
Motif
Pfam:
DEAD
AAA_22
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
WLS09154
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All DBs
Position
979480..983172
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AA seq
1230 aa
AA seq
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MAELDEDRRALAERFRLTHAIENALTSQQARLFVRSIQNSWGVQPLAWTQSQSIELFSEA
RRLLHAAGIFEDTDGSDSEAATSCYRRAGELLEWLSRSRDEVTREVPAEILAAGAYQLAG
LPAMATGILRLSKVDGAGGIIGAFLSCNFDSVLERTAVFWRDNADLTGRDGSARLLNAAE
DSATGFPPQTSKPDQEWDAEEDDVPREAPFSPIAWYIVVETVRTLGLLAEGLRRGEQDRT
GLALEKLKALVEVATRWANDETWIMLRLLFAAAERFARNNLHRRAAVLITDTVTAGERLS
RFAREQFGRGRGVLWASQIKGLERLAAGNAFALCTPTGSGKTMVANLALVKELLLTPPEP
GAPGRLALYLVPSRALAGEVEAKLSAEFRGEDIVVTGLYGGTDWGITDNWLTTETPTVLI
ATVEKAEALMRYVGRLLIHRLALLIIDEAHQVVVAGTPKTMRDLAAHGDRSMRLESLVSR
ILVLKPNIARIALTAVAGGAAPPVSRWIEDDEAANPVGLGYRSSRQLVGVLECRPKQSPF
ITLELNNGQPLYVRGRDAPVFLALGLPPMPDPPAGVKNSLHHYVQIHALWTALHLAPSGR
RILVSVTQGPDRVMRRYADAFDLTGWSAIAPFAPKTEYAQRLFDEARAACVDYCGEGSSE
VRLLDHGIATSHGQMPQRLRRLMVELIDKQVCPITVATATLTEGVNLPFDLIILPSLERI
VEFGTNGAPVTDIIPTSEFRNLAGRAGRPGAADAMEGLTLVCVPITNSATAASKQNEQRR
QRDAYVANLNRMLHLLALEESADLVVYAPLQTLLVSIWTKLRDYFGLRTVADLHDFLEQT
MPEGVGTDLGVGSSALLDLLGDSLDELDGVIIAAIDEVDRLEGLPPASLEAALSRVWQRT
FTRYSSAVEAWMEAAFIKRGQAVVERLYPDPIQRRTLYQIGFTPFVGRQFQQVSPQINAA
LKEAVDYGRRSPEARFTLFWQIGELVRTGRGFGFTSRSATEAALIGRWHEVAGWWLQREG
APPPPPAELRRWQGFVANNLEFRLGVAVGAAVAEAWNAGAGELEVPSLETWRATSGLPWI
GFWFRELLRWGTLDPFVAFALAQGIVGTRDEGAARRVDYDIWLVQRGTPISDEDLIDPQL
FLEWHRSLPKPDRAAAAPSTVSASFTEVEGKLSRYAVRPVPAPDGVIWLDPAGFQIAQSS
SIPGDPEVNASRRDYELVNDTFGVRIVRTY
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcttgatgaggatcggcgggcgcttgccgaaaggtttcgcttaacgcatgca
atcgaaaatgcgctaacttcccagcaagcgcgcttgttcgtgcgctccatccagaacagt
tggggtgtgcaaccactggcctggacacaaagtcagtcgatcgagctattcagtgaagcg
cgacggctgttgcacgctgctggaatcttcgaagatactgacggttccgatagcgaagcg
gcgacgtcctgctatcgccgcgcgggtgaactgctggaatggctttcgcgatcgcgcgat
gaggtcacacgtgaagtgcccgctgagattcttgcggccggtgcctatcaattggctggg
ctcccggcgatggcgacgggcatactgcgactgtcgaaggtagacggtgccggcggcatc
atcggtgccttcctatcctgtaatttcgattccgttctggagcgcacagcggtcttctgg
cgggacaatgccgatctcacgggacgagacggatccgcgcgcttactaaatgcagccgaa
gacagtgccacaggattcccgccgcagacgtcgaaaccagatcaagaatgggacgcggag
gaggatgacgtaccccgcgaggcgccctttagtcctatcgcatggtatatcgtcgtggag
acagtccggacgctcggtttgctggcggaaggattgcggcgcggcgagcaggaccgaaca
gggttagctctcgagaaattgaaagcgttagttgaggtcgcaactcgctgggcgaacgat
gagacctggatcatgttgcgccttctctttgctgcagccgagcgcttcgcgcgcaacaac
ttgcatcgacgcgccgcagtgctcatcacggacacagtgacggcgggagagcggctcagc
cgctttgctcgcgagcagtttggacgagggcgcggcgttctgtgggcctcgcagatcaaa
ggtctcgaacgactggcggcaggaaacgcctttgccctgtgtacaccgacagggtcgggc
aaaacgatggtggcgaatctcgcgctagttaaagagctgctacttacgccacctgaaccc
ggagcgccgggtcggctcgccctctatctggtaccctcgcgagcgctcgcgggtgaggtc
gaggcgaagctcagcgctgaatttcgcggcgaggatatcgtggtcacgggcctttatgga
ggtacggactggggtatcaccgataactggctgacgacggaaacgcccacggtcctcatc
gccacagttgaaaaagccgaagcgctgatgcgctatgtcggcaggctgctgattcatcgc
ctggctttgctcatcattgacgaggcgcatcaggtggtggtggcgggaacgccgaagaca
atgcgcgacctggcggcgcacggtgatcggtccatgcggcttgaaagcctggtgtcccgt
atcctcgtgctcaagccgaacatagcgcgcatcgcacttaccgcggttgccggcggcgca
gcgccacctgtatcgcgatggattgaggatgatgaagccgctaatccggtagggctcggc
tatcggagcagtcgtcaactagttggggtgctggaatgccgccccaaacaatcccctttc
attacgttagaactcaataatgggcagccgctctatgtgcgaggtcgtgatgcgcccgtg
ttccttgcacttggcttgccgccgatgcctgacccgccggcaggggtgaaaaacagccta
catcattatgtgcagatccacgcgctgtggactgcgctgcatcttgcgccgagcgggcga
cgtatactggtgtcggttacacagggtccagatcgtgtcatgcggcgctatgccgacgcg
tttgatctcacgggatggtcagcaatagcccccttcgcaccgaaaacagagtacgcacaa
cggctgttcgatgaggctcgcgccgcctgtgtcgactattgtggtgaggggtcgagcgag
gtccgccttctcgatcacggcatcgcaacaagccatggtcagatgccacagcggcttcgg
cgcctgatggttgagctgattgacaagcaggtgtgtcccatcacggttgcgaccgcgaca
ttgaccgaaggggtcaatctgcccttcgaccttatcattctaccgagcctagagcgtatc
gttgaattcggcaccaatggtgcgccggtaaccgatatcattcccacctcggagttccgc
aaccttgcggggcgcgccgggcggcccggggcggcggacgcgatggaaggtcttactctg
gtctgcgtgccaataacgaacagcgcgacggcggctagcaagcaaaacgagcagcgcagg
caacgtgacgcctatgtcgcaaacctcaaccggatgctccatctactggcgctcgaggaa
tcggccgatctcgtagtctatgcgccgctgcaaacattgctggtttcgatctggacaaaa
ttgcgggattacttcgggctgcgaaccgtggccgacctgcatgatttccttgaacagaca
atgcccgagggggtcgggaccgacctcggcgtcggttcatcagcgttgctcgacctgcta
ggcgacagccttgatgagcttgatggcgtgatcatcgctgccatcgacgaagtcgatagg
ctggaaggcttgccccctgcgtcgctcgaagccgccttgagccgtgtgtggcaacgaacc
tttacgcgatactcaagtgctgttgaggcctggatggaggcagccttcatcaaacgcggc
caagcggtggtcgaacgtctatatcccgacccgattcaacggcgaactctctatcaaata
ggctttacaccctttgtcggccgccaattccagcaggtatcgcctcagattaacgccgcc
ctcaaagaagcagtcgattatggccggagatcgccggaggcgcgcttcacgcttttttgg
cagatcggagagttggtacgaaccggtcgagggttcggttttacttcacggagcgctact
gaagccgcgctgatcgggcgctggcacgaggtagccggctggtggttgcaacgcgagggc
gctccaccgccgccgccagcggagttgagacgttggcagggatttgttgcgaacaatctg
gagtttcgtctcggggtggccgtcggcgctgccgttgcagaagcgtggaatgctggtgcg
ggcgaacttgaggtgccgagtctagaaacgtggcgggcaactagcggcctgccatggatc
ggattctggttccgcgaactgttacgatggggaacactggatccgtttgtcgcctttgcg
ctcgcacaggggatagtcggcacaagggacgaaggcgccgcacggcgtgtggattatgac
atatggttggttcaacggggcaccccgatctcagatgaggacttgatcgacccacagctc
tttctcgaatggcacaggtcgttgccaaagccggatcgggccgcagcagcacccagcacg
gtgagcgcaagcttcacggaagtggaagggaaactaagccggtacgcggtgcgaccagtg
ccagctcctgatggcgtcatctggctggatccagcaggctttcagattgcacaaagctca
tcgatccctggcgaccccgaggtgaatgcatcaagacgagattatgaactggtgaatgat
acctttggtgtccgaatagtgcgaacgtactaa
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