Shinella sumterensis: Q9314_05670
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Entry
Q9314_05670 CDS
T09417
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_05670 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_05670 (choX)
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Q9314_05670 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
SMG1_N
Motif
Other DBs
NCBI-ProteinID:
WLS09263
LinkDB
All DBs
Position
complement(1096061..1096990)
Genome browser
AA seq
309 aa
AA seq
DB search
MNRAIACAAACLMTIGAARAAEQESCRKVRLAEPGWNDLAFTTGVAQSLLHALGYETQSD
LLGIDVIYLSLKNKDLDVFLGYWDPAMRTYFAPYEKDGSVETVKQNLTGAKYTFAVPAYV
WDAGVKDFADLKTHADKFEKKMYGIEPGSNQLMLDAIADPSLGIEDWEVVESSEQGMLAE
LARHIDMKAFFVFQGWAPHPMNTAYDIRYLTGGDTFYGPDFGAATVSTQVRKGYLAECPN
VAQLLKNLTFDIDFENRGMGYLMNDGMAPEDAGRKAIGEEPKRLDAWLAGVTTVDGAPGL
AAVRKALGL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgccattgcctgcgccgccgcatgcctcatgacgatcggggccgcccgggcg
gccgaacaggagagctgccgcaaggtgcgccttgccgaacccggctggaacgacctcgcc
ttcacgaccggtgtcgcgcagtcgctgctgcatgcgctgggctacgagacgcagagcgac
ctgctcggcatcgacgtcatctacctgagcctcaagaacaaggatctcgacgtcttcctc
ggctactgggaccccgcgatgcggacctatttcgcgccttacgagaaggacggctccgtc
gagaccgtcaagcagaacctgacgggcgcgaaatacaccttcgccgttcccgcctatgtc
tgggatgccggcgtgaaggatttcgccgacctcaagactcatgccgacaagttcgagaag
aagatgtacggcatcgagccgggctccaaccagctgatgctggacgccatcgccgatccg
tcgctgggcatcgaagactgggaggtcgtggaatcgagcgagcagggcatgctggccgag
cttgcccgccacatcgacatgaaggccttcttcgttttccagggctgggcgccgcatccg
atgaacaccgcctacgacatccgctacctcaccggcggcgacacgttttacggcccggat
ttcggcgcggcgacggtctccacgcaggtccgcaagggctatcttgcggaatgcccgaat
gtcgcgcagcttctgaagaacctcaccttcgacatcgatttcgaaaaccgcggcatgggc
tacctgatgaatgacggcatggcgcccgaggatgccggccgcaaggcgatcggcgaggag
ccgaaacggctcgacgcctggcttgccggcgtgacgaccgtcgacggtgcgcccggtctt
gccgccgtccgcaaggcgctcggcctgtga
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