Shinella sumterensis: Q9314_05815
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Entry
Q9314_05815 CDS
T09417
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssum03400
]
Q9314_05815
DNA repair and recombination proteins [BR:
ssum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Q9314_05815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
FtsK_SpoIIIE
DUF87
AAA_10
ResIII
AAA_30
T2SSE
AAA_16
TrwB_AAD_bind
DUF5852
Hydrolase
AAA_7
AAA_19
Hydrolase_6
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WLS10047
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All DBs
Position
1122277..1123842
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AA seq
521 aa
AA seq
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MLQDGKLYIGTSRKPDDTNNKPEYLDLKFGNRHGLVTGATGTGKTVTLQILAEGFSNAGV
PVFCADVKGDLSGIGAIGEPKDFLQKRADQIGLTPYEFQEFPVIFWDLYGEKGHRVRTTI
SEMGPLLLSRLMNATDAQEGVINIAFKIADQGGLPLLDLKDFQALLNYMGENASTLSNQF
GFISKASVGSIQRELLILEQQGAVQFFGEPALKISDIMRTTNDGRGAISVLAADKLMMNP
RLYGTFLLWMLSELFEVLPEVGDPDKPKLVFFFDEAHLLFNDAPKVLIERVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPREQKAVKTAADTFRPNPDFNCAEV
ITNLGTGEALVSTLEGKGAPSMVERTLIRPPASRLGPVTDAERQAIMKVSPVAGLYDEDF
DRESAYEILTARAKKAADAAAAQQQADADQTSQQPSGGSRWTLPGFGDEEPAATSAPKQA
KPRAGYQRETVAEAAMKSVARTVASSLGRALVRGILGSLRR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
attcttcaggacggaaaactctatatcggcaccagccgcaagcccgacgacaccaacaac
aagcccgaatatctcgacctgaagttcggcaaccgccacggcctcgtgacgggcgcgacc
ggcacgggcaagacggtgacgctgcagatcctcgcggaagggttctccaatgccggcgtg
ccggtgttctgcgccgacgtgaagggcgacctctcgggcatcggcgcgatcggcgagccg
aaggattttctccagaagcgcgccgaccagatcgggctcacgccctacgagttccaggaa
ttccccgtgatcttctgggatctctacggcgagaagggccaccgcgtccgcaccaccatc
tccgaaatgggcccgcttttgctctcgcgcctgatgaatgcgacggatgcgcaggaaggc
gtgatcaacatcgccttcaagatcgccgaccagggcggcctgccgctgctcgacctcaag
gatttccaggcgctgctcaactatatgggcgagaacgcctcgacgctttccaaccagttc
ggcttcatctccaaggcctcggtcggctcgatccagcgcgaactgctgatcctcgaacag
cagggcgccgtgcagttcttcggcgagccggcactgaagatttccgacatcatgcgcacc
accaatgacgggcgcggcgcgatctcggtgctggccgccgacaagctgatgatgaacccg
cgcctctacggcaccttcctcttgtggatgctctccgagctcttcgaggtgctgccggaa
gtgggcgatcccgacaagccgaagctggtgttcttcttcgacgaggcccatctcctgttc
aacgatgcgccgaaggtgctgatcgagcgggtggagcaggtcgtgcgcctcatccgctcc
aagggcgtgggcgtctatttcgtcacgcagaacccgctggacgtgcccgagacggtgctc
gcccagctcggcaaccgcgtgcagcatgcgctgcgcgcctatacgccgcgcgagcagaag
gcggtgaagaccgccgccgacacattccgccccaacccggacttcaactgcgccgaggtc
atcaccaatctcggcaccggcgaggcgctggtctcgacgctggagggcaagggcgcgccc
tcgatggtggaacgcacgctgatccgcccgccggcctcgcggcttggccccgtcacggat
gcggagcgccaggcgatcatgaaggtgagccccgtcgccggcctctatgacgaggatttc
gaccgcgagtcggcctatgaaatcctgacggcgcgggccaagaaggcggccgatgccgcc
gccgcgcagcagcaggccgacgccgaccagacgagccagcagccctccggcggcagccgc
tggaccctgcccggcttcggcgacgaggagcccgccgccacgtccgcccccaagcaggcc
aagccccgtgcgggctaccagcgcgagacggtcgcggaagcggcgatgaaatccgtggca
cgcaccgtggcgtcctccctcggccgcgcgctggtgcgcggcatcctggggagcttgcgg
cggtag
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