Shinella sumterensis: Q9314_05950
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Entry
Q9314_05950 CDS
T09417
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
ssum
Shinella sumterensis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
WLS09315
UniProt:
A0AA50DA93
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Position
complement(1153240..1154865)
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AA seq
541 aa
AA seq
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MKAFSTLLDRLVLTPSRNGKLKLLADYFRDTPDPDRGYGLAAIAGTLDLKSVKPALLREL
VLERMDAVLFRYSYDYVGDLAETIALVWDQERKERVPDEAEPSLSAVVTRMNALGRTEVR
GAVRDLLDRLDPSGRFAFLKLATGALRIGVSARLAKQALAEFSGMDVTEIETLWHGLEPP
YEPLFAWLEGREERPVLATPAIFHSVMLANPVGDGDLVNLDPADFAAEWKWDGIRVQMSS
SGATRRLYSRSGDDISAAFPDVLDAMNFEGVVDGELLVGGTARMNSPTRTFSDLQQRLNR
KTVNTKMLEDYPAFVRAYDVLFEGEVDVRPDAFTERRKRLAGLIDKTPHDRFDLSPLVPF
ATWEELEAIRRDPPDPVIEGVMIKRLDSPYQAGRMKGPWFKWKRDPFNIDAVMMYAQRGH
GKRSSYYSDFTFGVWTEGPDGDVLVPVGKAYFGFTDAELEVLDRFVRNNTTERFGPVRAV
RAEPAHGFVLEVAFEGINRSNRHKSGVAMRFPRIARLRQDKLPADADRLETLMAMIDARE
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttctccacccttctcgaccgcctcgtcctcaccccttcgcgcaacggcaag
ctgaagctgctggcggactacttccgcgatacgccggaccctgatcgcggctatggcctt
gccgccatcgccggcacgctcgacctgaagagcgtcaagccggcgctgctgcgcgaactg
gtgctcgaacgcatggacgcggtgctgtttcgctattcctacgactatgtcggcgacctt
gccgagaccatcgcgctggtctgggaccaggagcgcaaggagcgcgtgcccgatgaagcc
gagccgagcctgagcgccgtcgtcacccgcatgaacgcgctcggccgcacggaggtgcgc
ggcgcggtgcgcgatctgctcgaccggctcgatccctccggccgcttcgccttcctgaag
ctcgccaccggtgccctgcgcatcggcgtctcggcgcgtctcgccaagcaggcgctcgcc
gaattctccggcatggacgtgaccgagatcgagacgctgtggcacgggctggagccgccc
tacgagccgctgttcgcctggctggagggcagggaggagcgcccggttctggccacgccg
gcgatcttccattccgtcatgctggccaatccggtgggggacggcgatctcgtcaatctc
gaccccgccgatttcgccgccgaatggaaatgggacggcatccgcgtgcagatgtcgtca
tcaggcgcgacgcggcggctctattcccgctccggcgacgatatctccgccgccttcccg
gatgtgctcgacgccatgaatttcgagggcgtggtggacggcgagctgctggtcggcggc
acggcgcgcatgaacagccccacgcgcaccttctccgatctccagcagcgcctgaaccgc
aagacggtcaacacgaagatgctggaggactaccccgccttcgtgcgcgcctatgacgtt
ctgttcgaaggcgaggtggatgtgcgtccggacgccttcaccgaacgccggaagcggctt
gccggcctcatcgacaagaccccacacgaccgcttcgacctctcgccgctcgttcctttc
gcgacatgggaggaactggaggccatccgccgcgatccgcccgatccggtcatcgagggc
gtgatgatcaagcgcctcgacagtccctaccaggccggccgcatgaaaggcccgtggttc
aagtggaagcgcgatccattcaacatcgatgccgtcatgatgtatgcccagcgcggccac
ggcaaacgctcgagctactattcggatttcaccttcggcgtctggacggaaggtcctgac
ggcgatgtgctggtgccggtcggaaaagcctatttcggcttcaccgatgccgaactcgaa
gtgctcgaccgcttcgtgcgcaacaacacgaccgagcgcttcggccccgtgcgcgccgtg
cgtgccgaacctgcccacggcttcgtgctggaagtggccttcgaaggcatcaaccgctcg
aaccgccacaaatctggcgtcgccatgcgcttcccccgcatcgcccggctcaggcaggac
aagctgcccgccgatgccgaccggctggaaacgctgatggcgatgatcgatgcgcgggaa
gcttag
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