Shinella sumterensis: Q9314_06575
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Entry
Q9314_06575 CDS
T09417
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ssum
Shinella sumterensis
Pathway
ssum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Q9314_06575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssum03400
]
Q9314_06575
Enzymes [BR:
ssum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Q9314_06575
DNA repair and recombination proteins [BR:
ssum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Q9314_06575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Nbl1_Borealin_N
DUF1184
Motif
Other DBs
NCBI-ProteinID:
WLS09434
LinkDB
All DBs
Position
1276888..1277142
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AA seq
84 aa
AA seq
DB search
MNTPTPATDVSALSFEQAVEELEKIVAALERGDVPLDRSIEIYERGEALKKHCETLLSAA
ENRIEKIRLDRAGKPQGTEPLDGA
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccccacccccgccaccgatgtttcggcgctgtccttcgaacaggccgtcgag
gaactggaaaagatcgtcgcggcgctggaacgcggcgacgtgccgctcgaccgctccatc
gagatctacgagcgcggagaagcgctgaagaagcactgcgagacgctgctttcggccgcc
gagaaccgcatcgagaagatccgcctcgaccgcgccggcaagccgcagggcaccgaaccg
ctcgacggcgcgtga
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