Shinella sumterensis: Q9314_06660
Help
Entry
Q9314_06660 CDS
T09417
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00521
Streptomycin biosynthesis
ssum00523
Polyketide sugar unit biosynthesis
ssum00525
Acarbose and validamycin biosynthesis
ssum00541
Biosynthesis of various nucleotide sugars
ssum01100
Metabolic pathways
ssum01110
Biosynthesis of secondary metabolites
ssum01250
Biosynthesis of nucleotide sugars
Module
ssum_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Q9314_06660
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Q9314_06660
01055 Biosynthesis of vancomycin group antibiotics
Q9314_06660
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Q9314_06660
00525 Acarbose and validamycin biosynthesis
Q9314_06660
Enzymes [BR:
ssum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Q9314_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
NmrA
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
WLS09451
LinkDB
All DBs
Position
complement(1292825..1293895)
Genome browser
AA seq
356 aa
AA seq
DB search
MASLNLDHIRTIVVTGGAGFVGSHIVDDLLAHCPMARIRVLDAFTYAADMSHLDAALRSG
RVTIQQGDVCNLDLVTEVLKGADLVVHAAAESHVERAFSVPERFTLANALGTQVLVEAMG
RRSVPLMIHISSAEVYGSGENAPAGERSPLMPDNPYGASKAAAEMLIAGLTRSFGLDIRV
LRPVNLIGTRQNVEKLLPRFLELAAVGRALPVHGDGLQRRSFLTIADFCTALRTVVTNGA
ENATYNVAGEDPVDILSVARMVLETVQDPVAGVSFVAGRPKNASRPPLDTSALKALGWQA
KGSLHGELPALAAWYGARIPGGARRRLAQVPDLAPQRVQVVTQTAGSGLFRSLERH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctcaacctcgaccatatccgcaccatcgtcgtgacgggtggcgccggcttt
gtcggctcccatatcgtcgacgatcttctggcccattgtccgatggcgcgcatccgcgtg
ctcgatgccttcacctatgccgccgacatgtcccatctcgatgcggccctgcgctccggg
cgggtgacgatccagcaaggcgatgtctgcaatctcgacctggtgacggaagtgctgaaa
ggggccgatctggtggtgcatgccgccgccgaaagccatgtcgaacgcgcattttcggtt
cccgagcgcttcacgctcgccaatgcgctgggcacgcaggtgctggtggaggcgatggga
cgccgcagcgtgccgctgatgatccatatcagttcggccgaagtctatggatcgggcgag
aacgcgccggccggcgagcgttcgccactgatgcccgacaatccctatggcgcctccaag
gccgcggccgaaatgctgatcgccggcctgacccgctccttcggcctcgatatccgcgtg
ctgcggcccgtcaacctgatcggcacgcgccagaacgtggagaagctgttgccgcgcttc
ctggaactggcggccgtcggccgcgcattgccggtacacggcgacggcctgcaacgccgc
agcttcctgacgatcgcggatttctgcacggcgctgcgcaccgtcgtcaccaacggcgcg
gaaaacgccacctacaatgtcgcgggcgaagaccccgttgatattctctccgtcgcgcgc
atggtgctggagacggtgcaggacccggttgccggcgtaagcttcgttgccggccgcccg
aagaatgccagccgcccgccgctcgatacgagcgcgctgaaagcgctcggctggcaggcg
aagggatcgcttcacggagaactgccggcgcttgccgcctggtatggcgcgcgcattccc
ggcggcgcacgccgccgcctcgcacaggtgcccgacctcgcaccacaacgcgtgcaggtc
gtcacgcagacggccggatcgggcctcttccgctcgctggagcggcattga
DBGET
integrated database retrieval system
