Shinella sumterensis: Q9314_07450
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Entry
Q9314_07450 CDS
T09417
Name
(GenBank) PAS domain S-box protein
Organism
ssum
Shinella sumterensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS
PAS_4
PAS_9
HATPase_c_2
Diguanyl_cycl_sensor
PAS_7
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WLS09593
LinkDB
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Position
1453112..1456615
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AA seq
1167 aa
AA seq
DB search
MSAKQYPFIDVAVHERVRLPFARGEAVVLFSQDLDRVLWSNGRGATLFGHDNVYDLLDAG
PERTDVAFRQLIATGRQVRTPGERRTLLMRIGSGFRSATVTATVEGITLRPGENAILFSA
PVSDTRQSAGDAAAAMIAGLDDPDTHMAVLDGDGAVIAASEKFEALAISPETRRTLVEAT
GRSADHLVKRPIATGRGHLPAAIGRISSDPALHLLFAVETILGHLDPDEADAEPHADVTD
SAAVEPAQEEAPTDLVTEDVPEQPVDAEDDRPSNEPLPEATIVALENTEAVTAEPVIEET
PAETADEQPAALEGDDPSASDVDPSGFVFNRQGRPVRFVWKIDAEGRFSEISEEFAAAVG
PRAAGISGERFGDVAARFDLDPDGKIGDLLRRRDTWSGKTILWPVEGTNLVVPVDLAALP
TYSRNREFDGFRGFGIVRIADAVADPHARGLTLATVTTPTEQDALVEEVLTEETGALLEK
AADELDADSDLAPAEDTQPPSEITPEASEEDDVASATAPEPTPEGEDAFRGERPALRLVE
TPARRHSDKVVQFESRRMRGGLLDGLSTGEQAAFREIARQLGETFGKRKPEDRPTDHASP
DATDDVIADREDTAGIDETAEAALAAENETEMPGLEVGPHADDMLHEEPASERSGFAPSR
RQMDYGLTAAVVDALPVALLVHVGDRLIHANPEFFRLTGYADLGDLEASGGIDILLAGRD
EEAEHHDGAMMLRHADGESTSTVRARLQSIRWEDGTALMLALTPIQEKPVLSLVETAPAP
SDTEARTEEQAAVSALRVEVSELRSILETATDGVVVVGQDGDIRSMNRSASALFNYDEDE
TRGRPFAMLFAHESQKAVLDYLTGLSGHGVASVLNDGREVIGREASGGFIPLFMTMGRLS
SSAGFCAVIRDITQWKRTEEELRNAKRAAETANAHKSDFLARVSHEIRTPLNAIIGFSDM
MATERFGPIGHPRYIEYANDIGRSGRHVLDIVNDLLDISKIEAGEMEMEFTAVGLNETIS
EAVALVQPQANAQRVIIRTSLSTNVPQIVADLRSIKQIALNILSNAIRFTPSGGQIVVST
AYEANGSVVLRIRDTGVGMTRSELEQAMKPFRQVTTGARKRGDGTGLGLPLTKAMVDANR
ANFAINSTPNEGTLVEVIFPSPRVLAD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaaacagtatccctttatcgacgtcgccgtccatgaacgggtgcgcctgccg
ttcgcacgcggcgaagccgtcgtgctgttttcgcaggacctggaccgcgtgctctggtcg
aacggccgcggcgccacgcttttcggccatgacaatgtctacgatctcctcgatgccggg
cctgagcgtaccgatgtcgccttccgccagctcatcgccaccggccgccaggtccgcacg
cccggcgaacggcgcacgctgctcatgcgcatcggcagcggcttccgcagtgcgaccgtg
accgcgaccgtcgaagggatcacgctgcgtccgggcgaaaacgccatcctgttcagcgcg
ccggtttccgacaccaggcagagcgcgggggacgccgcggcggcgatgatcgccggtctg
gacgatccggacacccatatggccgttctcgacggtgacggcgccgttatcgccgcctcg
gaaaaattcgaggccctggcgatcagcccggagacgcgccgcaccctggtggaggccacc
ggccgcagcgccgaccatctcgtcaagcgccctatcgccacggggcgcggccatcttccc
gccgccatcggccgcatctccagcgacccggcgctgcacctgctgtttgccgtcgaaacg
atcctcggccatctcgatcccgatgaggccgacgccgaaccgcacgcggacgtaacggac
agcgcagctgtcgaacccgctcaggaagaagcgcccaccgacctcgtcaccgaggacgtt
ccggagcaacctgtcgatgccgaggatgaccgtccttcgaacgagcctcttcccgaagcc
acaatcgttgcgcttgaaaatacggaagccgtcacggctgaacccgtgatcgaagaaaca
ccggcagagacggcggacgagcaaccggccgcgctcgaaggcgatgacccatcggcctcg
gacgtcgatccctcgggttttgtcttcaaccggcagggccgtcccgtccgcttcgtttgg
aagatcgatgccgaaggccggttcagcgagatctcggaggaattcgccgccgccgtcggc
ccgcgcgccgctggcatttccggcgaacgcttcggcgatgtggccgcccggttcgatctc
gatccggatggcaagatcggcgaccttctgcgccgccgcgacacctggtcgggcaagacg
atcctctggccggtcgagggcaccaacctcgtggtgccggtcgatctggccgcgctgccg
acctattcgcgcaaccgcgaattcgacggcttccggggtttcggcatcgtgcggatcgcc
gatgcggtggccgatccccatgcgcgcggcctcacgcttgcgaccgtcaccacgcccacc
gaacaggacgcgctggtggaagaggtcctgacggaagaaaccggggcgctgctggaaaag
gccgcggacgaactggacgcggacagcgatctggcgccggcggaagatacgcagccccct
agcgaaatcacgcctgaagccagcgaggaagatgacgtcgcctctgccaccgcaccggaa
ccgacgcccgagggcgaggatgcgttccgcggcgaacgtccggcgcttcgcctggtcgag
acaccggcccggcgtcattccgacaaggtcgtgcagttcgaaagccgccgcatgcgtggc
ggtcttctcgatggcctttccaccggcgagcaggccgcgttccgcgagatcgcccgccag
ctcggcgagaccttcggcaaacgcaagccggaagaccgcccgacggaccatgcgtcgccg
gatgcgacggacgacgttatcgcggaccgtgaggacacggccggcatcgacgagacagcc
gaggccgccctcgccgccgaaaacgagacggaaatgcccggcctcgaagtcggtccgcat
gccgacgacatgctgcatgaggagccggcgagcgagcgcagcggcttcgccccctcgcgc
cggcagatggactatggcctgaccgccgccgtggtggatgcccttcccgttgccctgctt
gtgcatgtcggcgaccggctcatccacgccaatcccgaattcttccgcctgaccggctat
gccgatctcggcgatctggaagcctccggcggcatcgatatcctgcttgcgggccgggac
gaggaggccgaacaccacgacggcgcgatgatgctgcgccacgccgatggggaaagcacc
agcaccgttcgcgcgcgtctccagtccatccgctgggaggatggcaccgcgctgatgctg
gcgctgacgccgatacaggaaaagccggtgctctcgcttgtcgagaccgcgccggcacct
tcggacaccgaagccaggaccgaggaacaggccgccgtatccgccttgcgcgtcgaggtc
agcgagcttcgctccatcctggaaacggcaaccgacggcgtggtcgtcgtcggccaggac
ggcgatatccgctccatgaaccgctcggccagcgcgcttttcaactatgacgaggacgaa
acgcgcggtcggcccttcgccatgctgtttgcccatgagagccagaaggcggtgctcgat
tatctcaccggcctttccggccatggcgttgccagcgtgctgaatgacgggcgcgaggtc
atcggccgcgaggcgtccggcgggttcattccgctgttcatgaccatggggcgcctctcc
tcctccgccggcttctgcgccgtgatccgcgacatcacccagtggaagcgcacggaagag
gagctgcgcaacgccaagcgcgccgccgagaccgcgaacgcccacaagagcgatttcctc
gcgcgcgtcagccacgagatccgcacgccgctcaacgccatcatcggcttttccgacatg
atggcgacggagcgcttcgggccgatcggccatccgcgctacatcgaatatgccaacgac
atcggccgctccggccgccatgtgctcgatatcgtcaacgacctgctcgacatttccaag
atcgaagcgggcgagatggagatggagttcaccgccgtcggcctcaacgagacgatctcg
gaggccgtggcgctcgtgcagccgcaggccaatgcccagcgcgtcatcatccgcacatcg
ctgtccaccaacgtgccgcagatcgtcgcggacctgcgctcgatcaagcagatcgcgctc
aatatcctgtcgaatgccatccgcttcacgccgtcaggcggacagatcgttgtttcgacg
gcctatgaggcgaacggaagcgtggtactgcgcattcgcgataccggcgtgggcatgacg
cgcagcgaactggagcaggcgatgaagccgttccggcaggtgacgacgggtgcgcgcaag
cgcggcgacggcaccgggctcggcctgcctttgaccaaggcgatggtggatgccaaccgg
gcgaacttcgccatcaactccaccccgaacgaaggcacgctggtcgaggtgatctttccc
tcgccgcgtgtgttggcagactga
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