Shinella sumterensis: Q9314_07585
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Entry
Q9314_07585 CDS
T09417
Name
(GenBank) substrate-binding domain-containing protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssum03000
]
Q9314_07585
Transcription factors [BR:
ssum03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Q9314_07585
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_23
HTH_3
HTH_26
Xre-like-HTH
HTH_IclR
HTH_Tnp_ISL3
HTH_24
Peripla_BP_6
HTH_Crp_2
EccE
Motif
Other DBs
NCBI-ProteinID:
WLS09618
LinkDB
All DBs
Position
1491249..1492277
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AA seq
342 aa
AA seq
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MNLKQLSQLLGLSQTTVSRALNGYPEVNAETRQRVLDAVRETGYRPNRAAQRLATGRAGS
IGLVMPTADGIESDVHFGEFLAGLGDEAVRHDFHFVINPSHPEDEVATCRRLVASGNVDA
LFLAYMREKDPRIAMMKSLKTPFIVHGRSIGMPDDYPYLDIDNTGAFYDAARLLTQLGHR
RFALINGPDYLAFSVRRRKGVARALAELGLSLREDCVTHAQMTDEHGFRAMQAFLRLEAP
PTAVLCSSTVLALGAVRAINQAGLKIGADISLIAHDDVLPMLKPENFMVPLTTTRSSLRA
AGQRIARRLIAQILQLETLPQQELWKADLIVRASTGPAPPEK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctcaagcaattatcgcaattgctgggcctctcccagactaccgtcagccgggcg
ctgaacggttatcccgaggtcaatgccgaaacgcgccagcgggtgctcgatgctgtgcgg
gaaacgggataccgccccaaccgcgccgcccagcgccttgccacaggccgtgccggctcg
atcggccttgtcatgccgacggccgacggcatcgaatccgacgtgcatttcggcgaattc
ctggcgggcctcggcgacgaggcggtcaggcacgatttccatttcgtcatcaacccgagc
cacccggaagacgaagtcgccacctgccgcaggctggtggcaagcggcaatgtggatgcg
ctgttcctggcctatatgcgggagaaggatccgcgcatcgccatgatgaagtcgctgaag
acaccgttcatcgtgcacgggcgatcgatcggcatgccggatgactatccgtatctggac
atcgacaatacgggcgcgttctacgatgccgcacgcctgctgacgcaactcggccatcga
cgcttcgcgctcatcaatggcccggattatctggcgttttccgtcaggcgtcggaaaggc
gtcgcgcgggcgctcgccgagcttgggcttagcctgcgcgaggactgcgtcacgcatgcg
cagatgaccgacgaacacggttttcgcgccatgcaggctttcctgcggctcgaggcgccg
ccgacggcggtgctctgttccagtacggttctggcgctcggcgccgtcagggcgatcaac
caggcggggctgaagatcggcgcggatatctccctgatcgcccatgacgacgtgctgccg
atgctgaagccggaaaacttcatggtgccgctgacgacgacgcgctcgtcgctgcgcgcc
gccggccagcgcatcgcccgccggctgatcgcccagattctccagctggagacactgccc
cagcaggaactctggaaggcggatctcatcgtgcgtgcctcgacgggccccgcgccgccc
gaaaaatga
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