Shinella sumterensis: Q9314_08400
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Entry
Q9314_08400 CDS
T09417
Name
(GenBank) PAS domain-containing hybrid sensor histidine kinase/response regulator
Organism
ssum
Shinella sumterensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
Response_reg
PAS_8
PAS_4
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
WLS09767
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Position
1651584..1655084
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AA seq
1166 aa
AA seq
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MPGSLIIALALAYLLLLFAVASYGDSKARRSERASKGRPLVYALSLAIYCTSWTYFGGVG
LATTHGLEFLGIYIGPILMFTLGMPLLRRIVTLAKSERLTSIADFVAARYGKNPGVAAVV
ALISLIGYIPYIALQLKAVSSSVAAMVDTTGFGIAASGGLIDLPLVVSLFLACFAIVFGT
RHTDATEHQDGLILAISMESVVKLIAMASVGFYVIFFMFDGPGDLWQRASESVPVMQALT
YETPLARWILLIVLSAFAIVMLPRQFHVTVVENRTMGELRTAGILFPLYLIAINLFVLPV
AIGGVLTFNGQGDADLYVLTLPFALDQPLLTLIAFIGGFSAATAMVIVASVALSIMVSND
IVIPVVLRRNLIGGVEQQDDLSRMLLRIRRLAIFFVILLGYAYYRATTANAGLASMGLLA
FAAVAQVAPALLGGLFWRNANARGAMAGMICGLVVWAYLLFLPSIGVADNAYVAETILGF
LFPGTTLFTGEAADPLVNATLVAMMVNVGAYVTGSLTRNPTSLERLQAGTFIRSKPRLER
AFRGRRTKVTVRDLKTTIAKYLGEERMQRSFHTYERQVGRWLEDNAPADAAIVHFSEQLL
GSAIGSSSARLVLSLVLQRIDDTPTDTDWLLDQASEALQYNQDMLQTALGQMDQGIAVFD
SDGNLTVWNRRFRQLLDLPEYVGQVGFPLADIVEILVERGDIAEDDRETAISRIMTFDEA
FPLVLAGGERIVEVRTNAMPEKGFVSTYTDITDRVAADRALKQVNETLEHRVAERTAELT
RVNTALAEARAAAEEANIGKTRFFAAAGHDILQPLNAARLYSSSLVERLGDTENREMIHN
IDSSLESVEAILGAVLDISRLDTGAMKPRVQTVLLKDLLKRIETDFAPIARAKDLSFKVL
PSSLAIRTDPNLLRRVVQNLVSNAIKYTQSGKVLVGVRRKGGHAVIQVLDSGIGIPASKF
RTVFKEFARLDEGARTAPGLGLGLSIVDRISRVLSHPVELQSTPGRGTSFKVRVPIDATA
SRPVAETSARAPVSEEPLKGLRVLCIDNEPRILDGMRLLLSGWGCTVTLADSVAAVDAVM
AQGAAGFDAVIADYHLDDGTGIAAIATLRKALGREVPALLVTADRTPDVRAEAERDNILV
QNKPVRPASMRAWLTQLSTVERAAAE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctcgctgatcatcgcgctcgcgctcgcctatctgctgctgcttttcgcggtc
gcaagttacggcgacagcaaggcccggcgctccgaacgcgcgtcgaagggccggccgctc
gtctatgcgctgagccttgcgatctactgcacctcctggacctatttcggcggggtgggc
ctcgccaccacgcatggccttgaatttctcggcatctatatcggcccgatcctgatgttc
acgctcggcatgccgctgctgcgccgtatcgtgacgctcgccaagtccgagcgcctcacc
tcgatcgccgatttcgtggccgcccgctacggcaagaatccgggtgtcgcggccgtcgtc
gcgctcatctcgctgatcggctacattccctatatcgcgctgcaattgaaggccgtgtcg
agctcggtcgccgcgatggtcgacacgaccggcttcggcatcgccgcttccggcggcctc
atcgacctgccgctggtcgtttcgctgttccttgcctgttttgccatcgtcttcggcacg
cgccacacggatgcgaccgagcatcaggacgggctcatcctcgccatctccatggaatcg
gtggtcaagctcatcgccatggcctcggtcggcttctacgtcatcttcttcatgttcgac
ggtcccggcgatctctggcagcgggcgtccgaaagcgtgcccgtgatgcaggcgctgacc
tacgagacgcccctcgcgcgctggatcctgctgatcgtgctgtcggccttcgccatcgtc
atgctgccgcgccagttccacgtcacggtcgtggaaaaccgcacgatgggggaattgcgg
acggccggcatcctctttccgctctacctcatcgccatcaacctcttcgtcctgcccgtc
gcgatcggcggcgtgctgaccttcaacggccagggcgatgccgatctctacgttctcacc
ctgcccttcgcgctcgatcagccgctcctgaccctgatcgccttcatcggcggcttttcg
gccgccaccgccatggtcatcgtcgcctcggtggcgctgtccatcatggtgtcgaacgac
atcgtcatcccggtcgtgctgaggcgcaacctcatcggcggcgtcgagcagcaggacgac
ctgtcgcgcatgctgctgcgcatccgccgtctcgccatcttcttcgtgatcctgctcggc
tacgcctattaccgcgcgacgaccgccaatgccgggctcgcctcgatgggcctgctggcc
tttgccgcggtggcgcaggtcgcgcccgcgctgctcggcggcctgttctggcgcaatgcc
aatgcacgcggcgccatggcgggcatgatctgcggcctcgtggtctgggcctacctgctg
ttcctgcccagcatcggggttgccgacaacgcctatgtcgccgagaccatcctcggcttc
ctcttccccggcaccacgctcttcaccggcgaggctgcggatccgctggtcaacgccacg
ctggtcgccatgatggtcaatgtcggcgcctatgtgaccggctcgctgacgcgcaatccg
acatcgctggagcgtcttcaggccggcaccttcatccgctccaagccccgcctggagcgc
gccttccgcggccgccgcaccaaggtcacggtccgggacctcaagaccaccatcgccaaa
tatctcggcgaagagcgcatgcagcgctccttccacacctatgagcggcaggtcggccgg
tggctggaggacaatgcgccggcggacgccgccatcgtgcatttttccgaacagcttctc
ggcagcgccatcggttcgtcctcggcgcgcctcgtgctctcgctcgtgctccagcgcatc
gatgacacgccgacggataccgactggctgctcgaccaggccagcgaggcgctgcaatac
aatcaggacatgctccagacggcgctcggccagatggaccagggcatcgccgtcttcgac
agcgacggcaatctcaccgtctggaaccggcgcttccgccagttgctcgacctgccggaa
tatgtcggccaggtcggcttcccgctcgccgatatcgtcgagatcctcgtcgaacgcggt
gacatcgcggaggacgacagggaaaccgcgatttcccgcatcatgaccttcgacgaggcc
ttcccgctggtgctggccggcggcgagcgcatcgtggaggttcgcaccaatgccatgccg
gaaaagggcttcgtttccacctataccgacatcaccgaccgggtggcggccgaccgcgcg
ctcaagcaggtcaacgagacgctggaacatcgcgtcgccgagcgcacggcggagctgacc
cgcgtcaacacggcgctggccgaggcccgcgccgccgccgaggaagccaatatcggcaag
acgcgcttcttcgccgccgccggccacgacatcctccagccgctgaatgccgcccggctt
tactcctcctcgctggtcgagcggctgggcgatacggaaaaccgcgagatgatccacaac
atcgattcctcgctggaatcggtggaggcgatcctcggcgccgtgctcgacatttcgcgc
ctcgataccggagcgatgaagccgcgggtgcaaacggtcctgctcaaggacctgctgaaa
cgcatcgagaccgatttcgcgcccatcgcgcgggccaaggacctgagcttcaaggtgttg
ccgagttcgctcgccatccgcaccgatccgaacctgctgcgtcgcgtcgtgcagaacctc
gtgtccaacgccatcaaatacacccagtccggcaaggtgctcgtcggcgtgcggcgcaag
ggcgggcatgccgtgatccaggtgctggattccggcatcggcattcccgcatcgaagttc
cgcacggtcttcaaggaattcgcccgcctcgacgagggcgcccgcacggcgccgggcctc
gggctcgggctttccatcgtggatcgcatctcgcgcgtgctctcgcatcccgtcgagttg
cagtcgacgcccgggcgcggcaccagcttcaaggtccgtgtccccatcgatgccacggca
agccggcccgtggccgaaacgtcggcacgcgcgccggtgagcgaagagccgctgaagggc
ctgcgggtgctgtgcatcgacaacgaacccaggatcctcgatggcatgcgtctgctgctg
tccggctggggctgtaccgtgacgctggcggattccgtcgcggcggtcgacgcggtcatg
gcgcagggcgcggccggattcgatgccgtcatcgccgactatcacctcgacgacgggacc
gggatcgccgcgatcgcgacgctgcgcaaggcactcggccgcgaggtgccggccctgctc
gtcaccgccgaccgtacgccggatgtgcgggccgaggcggaacgcgacaatatcctcgtg
cagaacaagcctgtccgccccgcctcgatgcgggcctggctcacgcagctttcaacggtg
gagcgcgcggccgcggagtga
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