Shinella sumterensis: Q9314_08470
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Entry
Q9314_08470 CDS
T09417
Symbol
pdeM
Name
(GenBank) ligase-associated DNA damage response endonuclease PdeM
KO
K06953
uncharacterized protein
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Q9314_08470 (pdeM)
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Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WLS10073
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Position
1665190..1665900
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AA seq
236 aa
AA seq
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MASTEIQDFGAVCARTVIAGVEAVCDPLGALYLPETRLLVVSDLHLEKGAAFARRGMMLP
PYDTLATLKVLEAVIRRHDPAIVISLGDNFHDRIGSAHLPEIFRAKIVELARGREWIWIN
GNHDPDGTVNLPGQSADELHYAGLAFRHEPSLIAPDGEIAGHLHPAATVIRREKAVRRPC
FATDGRRLLMPAFGIMTGGLDLRHRAMTGLFDRPSLIAHMLGRDRIYSVRFANLRG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
ttggcatcgacggagatacaggatttcggcgcggtttgcgcgcgcaccgtcattgccggg
gtcgaggccgtctgcgatccgctcggcgcgctgtacctgccggaaacccgcctgctcgtc
gtctccgacctgcacctcgaaaagggtgccgcctttgcccgccgcggcatgatgctgccg
ccctatgacacgctcgccacgctgaaggtgctggaagccgtcatccgacggcacgacccg
gccatcgtcatcagcctcggcgacaatttccacgaccgcatcggttccgcccacctgccg
gagatcttccgcgcgaagatcgtggaactggcgcgcggccgcgaatggatctggatcaat
ggcaaccacgaccccgacggcaccgtgaacctgccgggccagtcggccgacgagctgcat
tatgccgggctcgcctttcgccacgaaccgtcgctcatcgcgcccgacggcgagatcgcc
gggcatcttcatcccgccgccaccgtcatccgccgcgaaaaggcggtgcggcggccctgc
ttcgccaccgacggccggcgcctgctgatgccggccttcgggatcatgacgggcgggctc
gacctgcgccaccgggcgatgaccggtcttttcgaccggccaagcctgatcgcccacatg
ctcggccgcgaccgcatctactccgtgcggtttgccaatctgcgcggctga
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