Shinella sumterensis: Q9314_08520 Help Entry Q9314_08520       CDS       T09417                                  Name (GenBank) FAD-dependent oxidoreductase   KO K01782   3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Organism ssum  Shinella sumterensis Pathway ssum00071   Fatty acid degradation ssum00280   Valine, leucine and isoleucine degradation ssum00310   Lysine degradation ssum00362   Benzoate degradation ssum00380   Tryptophan metabolism ssum00410   beta-Alanine metabolism ssum00640   Propanoate metabolism ssum00650   Butanoate metabolism ssum00907   Pinene, camphor and geraniol degradation ssum00930   Caprolactam degradation ssum01100   Metabolic pathways ssum01110   Biosynthesis of secondary metabolites ssum01120   Microbial metabolism in diverse environments ssum01200   Carbon metabolism ssum01212   Fatty acid metabolism Brite KEGG Orthology (KO) [BR:ssum00001]  09100 Metabolism   09101 Carbohydrate metabolism    00640 Propanoate metabolism     Q9314_08520    00650 Butanoate metabolism     Q9314_08520   09103 Lipid metabolism    00071 Fatty acid degradation     Q9314_08520   09105 Amino acid metabolism    00280 Valine, leucine and isoleucine degradation     Q9314_08520    00310 Lysine degradation     Q9314_08520    00380 Tryptophan metabolism     Q9314_08520   09106 Metabolism of other amino acids    00410 beta-Alanine metabolism     Q9314_08520   09109 Metabolism of terpenoids and polyketides    00907 Pinene, camphor and geraniol degradation     Q9314_08520   09111 Xenobiotics biodegradation and metabolism    00362 Benzoate degradation     Q9314_08520    00930 Caprolactam degradation     Q9314_08520 Enzymes [BR:ssum01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.1  With NAD+ or NADP+ as acceptor     1.1.1.35  3-hydroxyacyl-CoA dehydrogenase      Q9314_08520  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.17  enoyl-CoA hydratase      Q9314_08520  5. Isomerases   5.1  Racemases and epimerases    5.1.2  Acting on hydroxy acids and derivatives     5.1.2.3  3-hydroxybutyryl-CoA epimerase      Q9314_08520 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  3HCDH_N ECH_1 3HCDH ECH_2 DAO NAD_binding_2 UDPG_MGDP_dh_N FAD_binding_3 NAD_Gly3P_dh_N F420_oxidored NAD_binding_8 ApbA Pyr_redox_2 Pyr_redox 2-Hacid_dh_C LSDAT_euk GIDA TrkA_N ThiF Motif Other DBs NCBI-ProteinID:  WLS09790 LinkDB All DBs Position 1678161..1680371 Genome browser AA seq 736 aa AA seqDB search MSAYKNFTIETDADGIALVTWDMPDKSMNVFTVEVMDELDKIIDQVVADGAIKGAVITSG KSSFSGGADLSMIKASFDLLKDAQAADPATAVQKLFETTGRMTWLFRKLETSGKPWVSAI NGTCMGGAFEMSLACHGRVASNAKSVKIALPEVKVGIFPGAGGTQRVPRLANAQDALQMM TTGSSLTGARAKAMNLVHQVVEPGELIPAAKQMIKDGLKPVQPWDEKGFKAPGGGIWTPA SAQLWPAAPAILRRETAGNYPGALAILKCVYEGLQVPFETGLRIEQRYFTHILQTTEAFS MIRSLFISMQELGKGARRPAGIPKAEFRKVAVVGAGFMGASIAYVTAAAGIPVVLIDRDQ EAADKGKTHSEGLVTGAIGKGRMSKEDGEKLLSLITPTPDYAALADADLVIEAVFEDRTV KKEVTEKIEAVLREDAIFASNTSTLPITGLARNSKRPDQFIGIHFFSPVEKMMLVEVILG KETGDKALATALDYVAAIKKTPIVVNDTRGFYVNRCVFRYMAEAYDMLIEGVPAAMIENA AKMAGMPVGPLSLNDEVAVDLSYKVFKAAIADLGEKAVDPRHMELVTTLVDGEGRLGRKA GKGFYDYPPKPQKKKLWPGLKDLYPQQKPEDVDIQVLKQRLLVTIALEAARTMEEGIVTD PREADVGSILGFGFAPYTGGTLSYIDGMGAKAFVALCEKLAARYGSHFQPTPLLKDMAAK GETFYGRFAPEAKKAA NT seq 2211 nt NT seq  +upstreamnt  +downstreamnt atgagcgcatacaagaacttcaccatcgagaccgacgccgacggcattgcgctggtcacc tgggacatgcccgacaagtcgatgaacgtcttcaccgtcgaggtgatggacgagctggac aagatcatcgaccaggtcgtggccgacggcgccatcaagggtgcggtcatcacgtcgggc aagtcctccttctccggcggcgcggatctctccatgatcaaggcgagcttcgacctcctg aaggacgcgcaggccgccgatcccgcgaccgccgtgcagaaactgttcgaaaccacgggc cgcatgacctggctgttccgcaagctggagacctccggcaagccctgggtctccgccatc aacggcacctgcatgggcggcgccttcgaaatgtcgctcgcctgccacggccgcgtcgcc tcgaatgccaagtcggtcaagatcgcgctgcccgaggtcaaggtcggcatcttccccggc gccggcggcacccagcgcgtgccgcgccttgccaatgcgcaggacgcgctgcagatgatg acgaccggctcgtcgctgaccggcgcgcgcgccaaggcgatgaacctcgtgcaccaggtc gtcgagcccggtgagctcatccccgccgccaagcagatgatcaaggacggcctcaagccc gtccagccctgggacgagaagggcttcaaggcccccggcggcggcatctggacgccggcc tccgcccagctctggccggccgcccccgccatcctgcgccgcgagaccgccggcaattat ccgggcgcgctcgccatcctgaaatgcgtctatgaaggccttcaggtgccgttcgagacg ggcctgaggatcgagcagcgctacttcacccacatcctgcagacgaccgaagccttctcg atgatccggtcgctgttcatctccatgcaggagctcggcaagggcgcgcgccggccggcc ggcattcccaaggcggagttcaggaaggtcgccgtcgtcggcgccggcttcatgggcgcc tccatcgcctatgtgacggccgccgccggcattccggtggtcctcatcgaccgcgaccag gaggccgccgacaagggcaagacccattccgaaggcctcgtcaccggcgccatcggcaag ggccgcatgtccaaggaggacggcgaaaagctgttgtccctcatcaccccgacccccgat tatgccgcgctcgccgatgccgacctcgtcatcgaggccgtcttcgaggaccgcacggtc aagaaggaggtgaccgagaagatcgaggccgtgctgcgcgaggatgccatcttcgcctcc aacacctcgacgctgccgatcacgggcctcgccaggaattcgaagcggccggaccagttc atcggcatccacttcttctcgccggtcgagaagatgatgctggtggaggtcatcctcggc aaggaaacgggcgacaaggcgctcgccaccgctctggattatgtcgccgccatcaagaag acgccgatcgtcgtgaacgatacacgcggcttctacgtcaaccgttgcgtcttccgctac atggccgaagcctatgacatgctgatcgaaggcgtgccggcggcgatgatcgagaatgcc gccaagatggccggcatgccggtcggcccgctgtcgctcaacgacgaggtggccgtcgac ctctcctacaaggtcttcaaggcggccatcgccgatctcggcgaaaaggccgtcgatccg cgccacatggaactggtgaccacgctggtggacggcgaaggccgcctcggccgcaaggcc ggcaagggcttctacgactacccgccgaagccgcagaagaagaagctgtggcccggcctg aaggacctctacccgcagcagaagcccgaggatgtcgatatccaggtgctgaagcagcgc ctgctcgtcaccatcgcgctggaagccgcccgcaccatggaggaaggcatcgtcaccgat ccgcgcgaggccgatgtcggctccattctcggtttcggcttcgcgccttataccggcggc acgctgtcctacatcgacggcatgggcgcgaaggccttcgtggcactctgcgagaaactg gccgcccgatacggcagccacttccagccgacgccgctcttgaaggacatggccgcgaag ggcgaaaccttctacggccgcttcgcgccggaggcgaagaaggctgcctga

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