Shinella sumterensis: Q9314_08695
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Entry
Q9314_08695 CDS
T09417
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00061
Fatty acid biosynthesis
ssum00071
Fatty acid degradation
ssum01100
Metabolic pathways
ssum01212
Fatty acid metabolism
ssum02024
Quorum sensing
ssum04146
Peroxisome
Module
ssum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q9314_08695
00071 Fatty acid degradation
Q9314_08695
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q9314_08695
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_08695
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssum01004
]
Q9314_08695
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssum04147
]
Q9314_08695
Enzymes [BR:
ssum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q9314_08695
Lipid biosynthesis proteins [BR:
ssum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q9314_08695
Exosome [BR:
ssum04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q9314_08695
Exosomal proteins of breast cancer cells
Q9314_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WLS09819
LinkDB
All DBs
Position
1713341..1715041
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AA seq
566 aa
AA seq
DB search
MSAIEQKPSTEASGRFWLASYPEGMAQTIAPLGHSSIGALVESCCARFAERPAFTSMGKT
LTFRDFDAASKKVAAWLQAQGLAKGDRVAVMMPNILQNPVVIFGILRAGLVVVNVNPLYT
PRELEHQLKDSGAKALFVLENFAGTVAQVVSRTAVRHVVVTTMGDMLGLKGLIVNLVVRK
IKKLVPAWSLPGHIPFKQVMAEGAHATLKPADISPGDTAFLQYTGGTTGISKGATLTHAN
LLSNMEQIKLWIEPVFRLKKRPEQLVFVCALPLYHIFALTVNGLMGIALGGHNVLIANPR
DIPAFVKELGKYRVHIFPGLNTLFNAMMNNPDFEKLDFSELVLTLGGGMAVQRPVAERWQ
KITGCAVTEGYGLSETSPVATANRFDSPDFTGTIGLPLPSTDIEIRDDEGKTLALGEVGE
ICIRGPQVMAGYWQRPDETAKVMTPDGFFRSGDVGFMTAEGYTKIVDRKKDMILVSGFNV
FPNEVEEVAMSLAGVLECAAIGVPDEHSGEAVKLFVVKKDDALTEADVKAHCVANLTNYK
RPKFIEFRTELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccatagaacagaagccatccaccgaagcgtccggccgtttctggctcgcgtcc
tatccagagggcatggcgcagacgatcgcgccgcttggccattcatcgatcggcgcgctg
gtggaaagctgctgcgcccgctttgccgagcgccctgcctttaccagcatgggcaagacg
ctcaccttccgcgacttcgacgcagcctcgaaaaaggtcgcggcctggctgcaggcgcag
gggctggccaagggcgaccgcgtcgcggtgatgatgcccaatatccttcagaacccggtc
gtgatcttcggcatcctgcgcgccggtctcgtcgtggtcaatgtcaatccgctctacacg
ccgcgcgagctggaacaccagctgaaggattcaggcgccaaggcactgttcgtgctggag
aatttcgccggcaccgtggcgcaggtcgtctcgcgcaccgccgttcgccatgtcgtcgtc
accacgatgggcgacatgctcggcctcaaagggctgatcgtcaatctcgtggtgcgcaag
atcaagaagctcgtgccggcgtggtccctgccggggcacattcccttcaagcaggtcatg
gccgagggcgcacacgccaccttgaagccggcggatatttcgcccggcgatacggccttc
ctgcaatataccggcggcacgacgggcatctccaagggcgcgacactcacccacgccaac
ctgctttccaacatggagcagatcaagctgtggatcgagccggtcttccgcctcaagaag
cggcccgagcagctcgtcttcgtctgcgcgctgccgctctaccatatcttcgcgctcacc
gtgaacggtctgatgggcatcgcgctcggcggccacaacgtgctgatcgccaatccgcgc
gacatcccggccttcgtcaaggaactgggcaagtaccgcgtccacatcttccccggcctc
aacacgctgttcaacgccatgatgaacaacccggatttcgaaaagctggacttctccgag
ctggtgctgacgctcggcgggggcatggcggtgcagcggcccgtcgcggagcgctggcag
aagatcacgggctgcgcggtgaccgagggctacggcctgtcggagacctcgccggtcgcc
accgccaaccgcttcgacagccccgatttcaccggcacgatcggcctgcccctgccctcc
accgatatcgagatccgcgacgacgagggcaagacgctggcgctcggcgaggtcggcgag
atctgcattcgcgggccgcaggtcatggccggctactggcagcggccggacgaaacggca
aaggtgatgacaccggatggtttcttccgctccggcgatgtcggcttcatgaccgcggaa
ggctacacgaagatcgtcgaccgcaagaaggacatgatcctcgtctccggtttcaacgtc
ttccccaacgaggtggaggaagtggcgatgtcgctggccggcgtgctggaatgcgcggcg
atcggcgtgcccgacgagcattccggcgaggccgtgaaactcttcgtcgtcaagaaggac
gacgccctgacggaagccgacgtgaaggcccattgcgtcgccaacctgacgaactacaag
cggccgaaattcatcgaattccgcaccgaacttcccaaatccaatgtcggaaagatcctt
cgcaaggacctccggggctga
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