Shinella sumterensis: Q9314_09210
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Entry
Q9314_09210 CDS
T09417
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssum03016
]
Q9314_09210 (miaB)
Enzymes [BR:
ssum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Q9314_09210 (miaB)
Transfer RNA biogenesis [BR:
ssum03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Q9314_09210 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
WLS09918
LinkDB
All DBs
Position
complement(1817410..1818801)
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AA seq
463 aa
AA seq
DB search
MSEQSLSAPDAPVATPNIRKVFVKTYGCQMNVYDSDRMTDALSKDGYQATDVLEEADLVL
LNTCHIREKAAEKVYSELGRLREMKKARARDGREMVIGVTGCVAQAEGREILRRAPAVDL
VVGPQTYHRLPDALRRAKGGERVVETDYAIEDKFEHLPAPEKAKTRARGVTAFLTVQEGC
DKFCTFCVVPYTRGSEVSRPVAQIVTEAERLVEGGVREITLLGQNVNAWHGLGPDGTEWG
LGDLLYRLAEIEGLARLRYTTSHPRDMDDRLIEAHRDLSKLMPYLHLPVQSGSDRILKAM
NRRHTAAEYIALIERIRAVQPDLAISGDFIVGFPGETDEDFEDTMRLIETVGYAQAFSFK
YSIRPGTPGAEMDGHVAEDVKAERLERLQALLFRQQREFARTCIGKEIDLLLEKPGRMPG
QLVGRSPWLQPVNIDAKGSEIGDIIRVRIIDAGPNSLFAEAIG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagtccctctctgcccccgatgcccccgtggccacgccgaacatccgcaag
gtcttcgtgaagacctacggctgccagatgaacgtctatgacagcgaccgcatgacggac
gccctgtccaaggacggctatcaggcgacggatgtgctggaagaggccgatctggtgctg
ctcaacacctgtcacatccgcgagaaggctgccgagaaggtctattccgaactcggccgc
ctgcgcgagatgaagaaggcgcgcgccagggacggtcgcgagatggtgatcggcgtcacc
ggctgcgtcgcccaggccgagggcagggaaatcctgcgccgcgcgccggccgtggacctc
gtcgtcggtccgcagacctatcaccgcctgcccgacgcgctgcgtcgtgccaagggcggc
gagcgtgtcgtggagacggactatgccatcgaggacaagttcgagcacctgccggcgccg
gaaaaggccaagacccgcgcgcgcggcgtcaccgcctttctcaccgtgcaggaaggctgc
gacaagttctgcaccttctgcgtcgtgccctatacgcgcggctcggaggtctcccggccg
gtcgctcagatcgtcacggaggccgagcgactcgtcgagggcggcgtgcgcgagatcacg
ctgctcggccagaacgtcaatgcctggcacggtctcgggcccgatggcaccgagtggggc
ctgggcgacctgctttaccggctcgccgaaatcgagggcctggcgcggcttcggtacacg
accagccatccgcgcgacatggacgaccgcctgatcgaggcccatcgcgacctgtccaag
ctgatgccctacctgcatctgcccgtgcagtccggctccgaccgtatcctcaaagcgatg
aaccgacgccacacggccgccgaatacatcgccctcatcgagcgcatccgcgcggtccag
ccggacctcgcgatctcgggcgatttcatcgtcggcttccccggcgagacggatgaggac
ttcgaggacacgatgcgcctcatcgaaaccgtcggttatgcacaggcattttcgttcaag
tattccattcgccccggcacgccgggcgcagagatggacggccatgtggccgaggacgtg
aaggccgaacgccttgaaagattgcaggctttgctgtttcgccagcagcgcgaattcgcc
aggacctgcatcggcaaggagatcgacctgctcctggagaagcccggccgcatgcccggc
cagctcgtcggccgctcgccctggctccagcctgtgaatattgatgcaaaaggttctgaa
atcggtgacattatccgggtacgaatcatcgatgccgggcccaacagcctcttcgccgaa
gcgatcggttga
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