Shinella sumterensis: Q9314_09335 Help Entry Q9314_09335       CDS       T09417                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism ssum  Shinella sumterensis Pathway ssum02020   Two-component system ssum02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ssum00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     Q9314_09335 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     Q9314_09335 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ssum03021]     Q9314_09335 (rpoN) Transcription machinery [BR:ssum03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      Q9314_09335 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  WLS09940 UniProt:  A0AA50HKC1 LinkDB All DBs Position 1844562..1846115 Genome browser AA seq 517 aa AA seqDB search MALAASLFLRQSQSLVMTPQLMQSIQLLQMTHFELNQFIEQEVEKNPLLEIAPADDGGGG GPSDHILVNDDRGPAESMGNEDAGQPDLYDNATMGSAGDASETFDGGLDNVFPDDAGPRA ADAPELIGQWKSMPGSEAGEGYDLDDFVAARKTLRDILNEQIPFALASPVDRLIAQHLVD QLDDAGYLQGNIAETALKLAKPVAEVERVLASLQQLEPHGVFARSLSECLALQLRALDRF DPAMAALVGNLELLARRDFATLKKLCGVGEEDLLDMLAEIRKLDPKPGTRYETGASEAVV PDIIVRAAPDGSWHIELNADTLPRVLVNRDYYANVSSRTRRDSEDHGFLNECLQTANWLT RSLDQRARTIMKVATEIVRQQDAFLMHGVDHLRPLNLKTVADAIKMHESTVSRVTSNKYM LTPRGLFELKYFFTVSIGSAEGGDSHSAESVRHRIRTMITQEDPAAVLSDDDIVDALRKG GVDLARRTVAKYREAMNIPSSVQRRREKRALARATAS NT seq 1554 nt NT seq  +upstreamnt  +downstreamnt atggcactcgcagccagcctttttctgcgccaaagccagtcgctggtcatgacaccgcag ctgatgcagtcgattcagctgctgcagatgacgcatttcgagctcaaccagttcatcgag caggaagtcgagaagaatccgctgctcgaaatcgcaccggccgacgatggcggcggtggc gggccaagtgaccatattctcgtcaatgacgaccgcggccctgccgaaagcatgggcaat gaggatgccggccagccggatctctacgacaatgccacgatgggcagcgcgggcgacgcc tccgaaaccttcgacggcggcctcgacaacgtgtttccggatgatgccgggccgcgggcc gcggatgccccggagctgatcggccaatggaagtcgatgcccggcagcgaggcgggcgaa ggctatgacctcgacgacttcgtggccgcacgcaagacgctgcgcgatatcctgaacgag cagatccccttcgcgctcgcaagtcccgtcgaccggctgatcgcccagcatctggtcgac cagctggacgatgccggctatctgcagggcaatatcgccgagacggcgctgaagctcgcc aagccggtggccgaggtggagcgcgttctcgcaagcctgcagcagctggagccgcacggc gtgtttgcccgctcgctcagcgaatgcctcgccctccagctgagggcgctcgaccggttc gatccggcgatggccgcgctcgtcggcaatctcgagctgctcgcccggcgcgatttcgcc acgctcaagaagctgtgcggcgtgggcgaggaggacctcctggacatgctggcggaaatc cgcaagctcgatcccaagccgggcacgcgctacgagacgggcgcatcggaagccgtggtg cctgatatcatcgtgcgcgctgcccctgacggctcctggcacatcgagctcaacgccgac acgctgccgcgcgtgctcgtgaaccgcgattactacgccaacgtctccagccgcacgcgc cgcgacagcgaagaccacggcttcctcaacgaatgcctccagacggccaactggctgacc cgcagcctcgaccagcgcgcccgcacgatcatgaaggtggccaccgagatcgtgcgccag caggatgccttcctcatgcacggcgtcgatcatctgcgcccgctgaacctcaagacggtc gccgacgcgatcaagatgcacgaatcgacggtgagccgcgtcacgtccaacaaatacatg ctgacgccgcgcggccttttcgagctgaaatatttcttcaccgtctcgatcggctcggcc gaaggcggcgattcccattccgccgagagcgtacgccaccgcattcgcaccatgatcacg caggaggaccctgccgcggtactgtccgacgacgacatcgtcgatgccctgcgcaagggg ggggtggatctcgcacgccgcacggtcgccaagtaccgcgaggcgatgaacatcccctcg tccgtacagcggcgccgggaaaagcgggcgcttgccagggccacggcctcgtaa

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