Shinella sumterensis: Q9314_10150
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Entry
Q9314_10150 CDS
T09417
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssum03000
]
Q9314_10150
Transcription factors [BR:
ssum03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Q9314_10150
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
HTH_24
HTH_Crp_2
Dimerisation
MarR_2
HTH_9
HTH_29
HTH_23
HTH_20
HTH_47
TrmB
B-block_TFIIIC
Penicillinase_R
Motif
Other DBs
NCBI-ProteinID:
WLS06588
LinkDB
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Position
2001075..2001905
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AA seq
276 aa
AA seq
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MAEHQEKTRGRPGRKPAADAAPSSVQVLDRSLKLLDLVAQADGAGLSDLADQSGMAPSTV
HRLLTSLAQHGMVAHDAETGAWTIGVKAFEIGTAYLRFRKLGTISRPFLKQLMESCGETA
NIAIEDDGDVVFISQVESHAPMRAFFRPGRRGPIHASGIGKAILSTWPDARIEALLSGRA
LQHFTEKTRDTIPTLLEDIAAIRARGWSIDDEEHTLGMRCVAAPIFDEYGEAVAGISVSG
PAVRLPDSKIDAFGPVVRAAAEGLTKAMGGRATKPE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcatcaggaaaaaacgcggggacggcctggtcgcaagccggcggcggatgcc
gcaccctcctccgtgcaggtgctggacaggagcctgaagctgctcgacctcgtggcgcag
gccgacggcgccggcctcagcgaccttgccgaccagtccggcatggcgccatcgaccgtg
caccggcttttgacctcgcttgcccagcacggcatggtcgcccatgatgcggagacgggc
gcctggacgatcggcgtgaaggccttcgagatcggcaccgcctatctgcgcttccgcaag
ctcggcacgatcagccggcccttcctgaaacagctgatggaaagttgcggcgagacggcc
aacatcgccatcgaggacgacggcgacgtggtgttcatctcgcaggtggaaagccacgcg
ccgatgcgcgccttcttccggcccggccggcgcgggccgatccatgcctcgggtatcggc
aaggcgatcctctcgacctggccggatgcccgcatcgaggcgctgctctccggccgcgcg
ctgcagcactttacggaaaagacccgcgacacgatcccgacgctcttggaggacatcgcg
gcgatccgcgcgcgcggctggtcgatcgacgacgaggagcacacactcggcatgcgttgc
gtggccgcgccgatcttcgacgaatatggcgaggccgtcgccggcatctccgtctccggc
ccggccgtgcgcctgcccgacagcaagatcgacgcctttggcccggtcgtgcgggcggcg
gcggagggattgacgaaggcgatgggcgggcgggcgacaaaaccggaatag
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