KEGG   Shinella sumterensis: Q9314_10365
Entry
Q9314_10365       CDS       T09417                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
ssum  Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:ssum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssum03400]
    Q9314_10365
Enzymes [BR:ssum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     Q9314_10365
DNA repair and recombination proteins [BR:ssum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Q9314_10365
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy
Other DBs
NCBI-ProteinID: WLS06624
LinkDB
Position
complement(2046177..2046800)
AA seq 207 aa
MTETGHGLAPGVRYVPDHFDRAAQEALVADIRAVVADAPLYVPRMPKTGKAMSVRMTNCG
ALGWVTDKDNGYRYQATHPETGRPWPAIPQTLLALWEAVSGFAKPPEACLVNFYDPEAKM
GLHQDRDETDLAAPVVSVSLGDQCLFRVGGTSRSDPTRSFRLSSGDVFVFGGESRLIFHG
VDRIYPGTSTLLRNPGRINLTLRRVNP
NT seq 624 nt   +upstreamnt  +downstreamnt
gtgacggagacggggcacggcctcgcaccgggggtgcgctatgtccctgatcatttcgat
cgtgcggcgcaggaagccctcgtggccgacatccgcgcggtcgttgccgatgcaccgctt
tacgtgccgcgcatgccgaagaccggcaaggcgatgtccgtgcgcatgaccaattgcggc
gcgctcggctgggtgacggacaaggacaacggctaccgttaccaagccacccacccggaa
acaggccgtccctggccggccatcccgcaaacgcttctggcgctatgggaagcggtttcc
ggcttcgcaaagccgccggaagcctgcctcgtcaatttctatgatccggaggcgaagatg
ggcctgcatcaggaccgcgacgagacggatcttgccgcaccggtcgtctccgtctcgctc
ggcgaccagtgcctgttccgcgtcggcggcacgtcgcgcagcgatccgacgcgctcgttc
cggctgtcgagcggcgacgtcttcgtgttcgggggcgaaagccggctcatcttccatggc
gtcgaccggatctatcccggcacgtccacgctcctgagaaatcccgggcgcatcaacctg
acgctgcgacgcgtcaatccttga

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