Shinella sumterensis: Q9314_10430
Help
Entry
Q9314_10430 CDS
T09417
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssum03400
]
Q9314_10430 (addB)
Enzymes [BR:
ssum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q9314_10430 (addB)
DNA repair and recombination proteins [BR:
ssum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Q9314_10430 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Histidinol_dh
Motif
Other DBs
NCBI-ProteinID:
WLS06636
LinkDB
All DBs
Position
2060250..2063438
Genome browser
AA seq
1062 aa
AA seq
DB search
MSGASGGRIYTIPASLPFLKTVAEALVDGRLVPGFTYDPADPLALADVTIYVPTRRSARV
LRSEFVDLFGGRSAILPTIRGLGETEDDSGFFDEVAPALLDMAEPLSGPTRLLELARLVL
AWRNQLPAAVTAVHAESPLVAPASPADAVWLARNLADIIDAMETEELDWTALDALDTSNH
ALWWQLTAEFLKIASDFWPARLAELTRSSPSLRRNATLHAETERYRHTPPAGPVIIAGST
GSIPATAGLIAAVAKLPNGVVILPGLDRFMSDTDWLLVGHQGGGADTARKPDAASRSHPQ
YGLHRLLARMGCTRDDVEPLGTPPETLEYRARILSSAFLPTQATAGWGDVRSTLDAGRVA
DAFRDVALVEAANEREEAVAIAIALRLALEDGPDAQAALITPDRKLGRRVAAELARFGIE
ADDSAGTPLLSTPQGTLLRLLAEAALRPGDPVALVALLKHPLARFGLSADDRRDAVTALE
LTALRGGTAEIDISTLEPLLDAALARQAEDRHPPRWRSALPETALPLARTLARRVADAVE
PLAGVLVQQSRTGRRFSSRLAVSDWAERTGRALEAVAIDERNDLAALWSGEAGDSLANLL
KSVMETDGQIEADGPQWCDIIEALAASESVKPRSMRHPRVFIFGALESRLQSVDTVVIGG
LNEGTWPGQAANDAFLSRIMKVEIGLEPPERRIGQLGHDLQMAAGTRKLILTRALRNGTA
PTVASRWLQRLLAVGGPSLANDLRSRGRDLIDWAGRIDQGQSVPNAPRPSPKPPSGLQPK
KYSFSEVGRLRRDPYAIYARHILRLDPIAPFNLDPGPAERGSLYHRIVDRFVREEKTGEP
LTLIDRILHEEFDAVALPPHIDAVWRPRFAAVARAFVAWHGERAGGVRESLTEVPASLDL
SVGDIRLTGIADRIDILPDGSADILDYKTGSTPSLKVARALLDPQLALEAAAMRRGAFRG
PGRRDPANLLYVRLKPGERFKVEQVNNEHAKSASTTPKSAFDLGEEALAELEKLLTGLIE
GRFGFASRLIPEQERDYGGEYDHLARVAEWSSAENGGESDDA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcgtcgggcggccggatctacacgatcccggcgagcctgcccttcctgaag
acggtcgccgaagcgcttgtcgacgggcggctcgtgcccggcttcacctacgatcccgcc
gatccgctggccttggcggatgtcaccatctatgtgccgacccgccgctccgcgcgcgtg
ctgcgctcggaattcgtcgacctgttcggcggccgctcggccatcctgcccaccatccgc
gggctgggcgagaccgaggacgacagcggtttcttcgacgaggtggcgccggcactgctc
gacatggccgagccgctctccggcccgacgcggcttctggaacttgcccggctcgtgctg
gcctggcgcaaccagctgccggccgccgtgaccgcggtgcatgccgaaagcccgctcgtc
gctccggcaagcccggcggatgccgtctggctcgcccgcaatctcgccgacatcatcgat
gcgatggagacggaggagctggactggacggcgctcgatgcgctcgatacgtccaaccat
gcgctgtggtggcagctgacggccgaattcctgaagatcgccagcgatttctggccggcg
cggctggcagaactcacccgctcctccccttcgctgcgccgcaacgcgacgctgcatgcc
gagacggagcgctatcgccacacgccgccggctggccccgtgatcatcgccggctccacg
ggctcgattcccgccaccgcagggctgatcgcggcagtggcaaagctaccgaacggcgtc
gtcatcctgcccggcctcgaccgcttcatgagcgacaccgactggctgctcgtcggacat
cagggcggcggcgcggacacggcgcgcaagccggatgcggcctcgcgcagccacccgcaa
tacgggctccaccgcctgctcgcccgcatgggctgcacgcgcgacgatgtcgagccgctg
ggcacgccgccggagacgttggaataccgcgcgcggatcctttcaagcgcattcctgccg
acgcaggcgacggcgggctggggcgacgtgcgctcgacactggatgccgggcgcgtggcc
gatgccttccgcgacgtcgcgctggtggaagcggccaatgaacgcgaggaggccgtggcg
atcgccatcgcgctgcggcttgcgctggaggacggcccggacgcgcaggccgcgctgatc
acgccggaccgcaagctcggccggcgcgtcgccgccgagctggcccgtttcggcatcgag
gcggacgattccgccggcacgccgctcctttccaccccgcagggcacgctgctgcgcctg
ctcgccgaggcggccctgcgccccggcgatcccgtggcgctcgtggcgctgctgaaacat
ccgcttgcccgcttcgggctttccgccgacgaccggcgcgacgcggtgacggcgctggag
ctgacggccctgcgcggcggcacggcggaaatcgacatctcgacgctggagcctttgctc
gacgccgcgctggcgcggcaggccgaggatcgccacccgccgcgctggcgcagtgcgctg
ccggaaaccgccctccccctggcgcgcacgcttgcaaggcgcgtagcagacgcggtggag
ccgctcgccggtgtgctcgtgcagcagagccgcacggggcggcgcttctcttccaggctt
gccgtctcggactgggcggagcgcaccggccgtgcgctggaggccgtcgccatcgacgag
cgcaacgacctggccgcgctgtggtccggcgaggcgggcgacagcctcgccaacctgctc
aagagcgtgatggagaccgacgggcagatcgaggccgacgggccgcaatggtgcgatatc
atcgaggcgctcgcggcgagcgaaagcgtcaagccgcgctcgatgcgccatccgcgggtc
ttcatcttcggcgcgctcgaatcgcgcctccagagcgtcgataccgtggtcatcggcggg
ctcaacgagggcacctggccgggccaggcggccaacgacgcctttctctcccgcatcatg
aaggtggagatcggcctggagccgcccgagcgccgcatcggccagctcggccacgatttg
cagatggccgcgggcacgcgcaagctgatcctcacacgggcgttgcgcaacggcaccgcc
ccgaccgtcgcctcgcgctggctgcaacggctgctcgccgtcggcggtccttcgctggcg
aacgacctgcgcagccgcggccgcgacctgatcgactgggccgggcggatcgatcagggt
cagagcgtgccgaacgcgccgcgcccatcgcccaaaccgccgtccgggctgcaaccgaag
aaatattccttcagcgaggtcgggcggctgcgccgcgacccctatgcgatctatgcccgg
catatcctgcggctcgaccccatcgcgccgttcaacctcgaccccgggccggccgagcgc
ggttcgctctatcaccgcatcgtcgaccggttcgtgcgcgaggagaagaccggcgaaccg
cttaccctcatcgaccgcatcctgcacgaggaattcgatgcggtcgcgctgccgccgcat
atcgacgccgtctggcggccgcgctttgccgccgtcgcccgcgccttcgtcgcctggcat
ggcgagcgggccggcggcgtgcgcgaaagcctgacggaggtgccggcgtcgctcgatctc
tcggtcggcgacataaggctgaccgggattgccgaccgcatcgacatcctgcccgacggc
agcgccgacattctcgactacaagaccggcagcacgccttcgctcaaggtggcgcgcgcg
ctgctcgatccgcagctggcgctggaggcggcggcgatgcggcgcggggccttccgcggc
ccgggacgccgcgacccggctaatcttctctatgtgcgcctgaagcccggcgagcgcttc
aaggtcgagcaggtcaacaacgaacacgcgaaatccgccagcacgacgccgaaatccgcg
ttcgacctgggcgaggaggcgctggcggagctggagaagctgctgaccgggctgatcgaa
gggcgcttcggcttcgcctcgcggctcattccagaacaggagcgcgactatggcggcgaa
tacgaccatctggcgcgcgtcgccgaatggtcgtctgccgaaaacggcggggagagcgac
gatgcttga
DBGET
integrated database retrieval system
