Shinella sumterensis: Q9314_10535
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Entry
Q9314_10535 CDS
T09417
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00250
Alanine, aspartate and glutamate metabolism
ssum00310
Lysine degradation
ssum00350
Tyrosine metabolism
ssum00650
Butanoate metabolism
ssum00760
Nicotinate and nicotinamide metabolism
ssum01100
Metabolic pathways
ssum01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Q9314_10535 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Q9314_10535 (gabD)
00310 Lysine degradation
Q9314_10535 (gabD)
00350 Tyrosine metabolism
Q9314_10535 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Q9314_10535 (gabD)
Enzymes [BR:
ssum01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Q9314_10535 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Q9314_10535 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Q9314_10535 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
WLS06657
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Position
complement(2085270..2086721)
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AA seq
483 aa
AA seq
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MSLKDPSLLRQAALVGTRWIEADGSGIAVKNPATGELVGYVPKLGAAETKEAIDAAAAAQ
KGWAARTAKERSAVLRKWFDLMIENKDDLGRILTLEQGKPLAEATGEIVYGASFIEWFAE
EARRLYGDIVPGHQKDKRILVMKQPIGVVAAITPWNFPNAMITRKAGPAFAAGCAMVLKP
ASQTPFSAIAIAVLAERAGLPAGLFSVVTGSAREIGAELTANPTVRKLTFTGSTEIGAEL
YKQCAPTIKKLGLELGGNAPFIVFDDADLDAAVEGAMIAKFRNNGQTCVCANRLYVQDGV
YDAFSEKLAAAVGKLKTGNGFDEGVILGPLIDEAALEKVEEHVADAVRKGGKVIQGGKRH
ELGGTFYEATVIAGVTPDMAVAREETFGPVAPLFRFKDEDDVIAQANDTEFGLASYFYAK
DLSRVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSRYGIEEFTEIKYVCLG
GIG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaaagacccgagcctgctgcgccaggcagcccttgtcggcacacgctggatc
gaagcggatgggagcggcatcgcggtgaagaacccggcgacgggtgagctggtcggctat
gtcccgaagctcggtgctgcggagacgaaggaggccatcgacgcggccgcggcagcccag
aagggctgggcggcgcgcaccgccaaggaacgctctgcggtgctgcgcaagtggttcgac
ctgatgatcgagaacaaggacgatctcgggcgcatcctcaccctggaacagggcaagccg
ctggcggaagccaccggcgagatcgtctatggcgcaagcttcatcgagtggttcgccgag
gaagcccgccgtctctatggcgatatcgtgcccggccaccagaaggacaagcgcatcctc
gtgatgaagcagccgatcggcgtggtcgcggccatcacgccgtggaacttccccaatgcg
atgatcacccgcaaggccggcccggccttcgccgccggctgcgccatggtgctgaagccg
gcctcgcagacgccgttctcggccattgcgattgccgtgctggccgagcgcgccggcctg
cccgccggcctgttctccgtcgtcacgggctcggcccgcgagatcggtgcggaactgacc
gccaatccgaccgtgcgcaagctcaccttcaccggctcgacggaaatcggcgccgagctc
tacaagcagtgcgcgccgaccatcaagaagctcggcctggaacttggcggcaatgccccc
ttcatcgtcttcgacgatgccgatctggatgcggccgtcgagggcgcgatgatcgccaag
ttccgcaacaacggccagacctgcgtctgcgcgaaccgcctctatgtgcaggacggcgtc
tatgatgccttctccgaaaagctcgcggccgccgtcggcaagctgaagaccggcaacggc
ttcgacgagggcgtgatcctcgggccgctgatcgacgaggccgcgctggagaaggtcgag
gagcatgtggccgacgccgtcaggaagggcggcaaggtcatccagggcggcaagcgccat
gaactgggcggcaccttctatgaagcaacggtcattgccggcgtgacgcccgatatggcg
gtggcgcgcgaggagaccttcggcccggtcgcaccgctcttccgcttcaaggacgaggac
gatgtgatcgcgcaggccaacgatacggagttcggccttgcctcctatttctatgccaag
gacctgtcgcgggtgttccgcgtggccgaagcgctggaatacggcatggtgggcgtcaat
accggcctcatctcgacggccgaagcgcccttcggcggcgtaaaactctccggcctcggc
cgcgagggctcgcgctacggcatcgaggagttcactgaaatcaaatatgtctgcctcggc
ggtatcggctga
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