Shinella sumterensis: Q9314_10795
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Entry
Q9314_10795 CDS
T09417
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ssum
Shinella sumterensis
Pathway
ssum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q9314_10795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssum03019
]
Q9314_10795
Messenger RNA biogenesis [BR:
ssum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q9314_10795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
WLS06706
LinkDB
All DBs
Position
complement(2142612..2143139)
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AA seq
175 aa
AA seq
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MGKEKDKVVRAEDLPYRPCVGIMVLNAENKVWAGHRLAVGNSEYDGSPQLWQMPQGGIDE
GEDPLEAAYRELYEETGMKSVSLIADAGRWINYDLPAHLIGIGLKGKYRGQTQRWFAFRF
EGDESEIAINPPPGGHTAEFDEWAWKPMRDLPELIVPFKRKVYEEVVATFAHLAP
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaaggacaaggtggtcagggccgaggacctgccttaccgcccctgtgtg
ggcatcatggtgctgaacgccgaaaacaaggtctgggccggtcaccggctcgcggtcggc
aattccgaatatgacggctcgccgcagctctggcagatgccgcagggcggcatcgacgag
ggcgaggacccgctggaggccgcgtaccgcgagctctacgaagagaccggcatgaagagc
gtctcgctgatcgccgatgccggccgctggatcaactacgacctgccggcgcacctgatc
ggcattggcctgaagggaaaatatcgcggccagacgcagcgctggttcgccttccgcttc
gagggcgacgaaagcgagatcgccatcaacccgccgccgggcgggcacacggccgagttc
gacgaatgggcgtggaagcccatgcgcgacctgccagaactcatcgttccgttcaagcgc
aaggtctacgaggaggtcgtggcgaccttcgcccatctcgcgccctga
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