Shinella sumterensis: Q9314_11280
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Entry
Q9314_11280 CDS
T09417
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_11280 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_11280 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_11280 (lsrA)
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
Q9314_11280 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WLS06793
LinkDB
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Position
2234553..2236055
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AA seq
500 aa
AA seq
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MTDQAATGRVAQLTDIWKSYGAVPVLKGVSLALQAGEVHALLGGNGAGKSSLMKIMSGVI
AANSGAIEINGRPLTQASPAHAQELGLYLVPQEAHILPNQSVLENICLGLSASPRALRPR
VAQLVAELAVSLDLDAQAAALEIAERQIVEILRGLVRDARVLILDEPTSALTPFETNALF
QRVRKLQAQGVGIFFISHKLREIREICRTISVLRDGVIVLSGPLDSYSDAEIIDAMSRVQ
ITEASGKDRTGRKVSQIGQPRLSVRGLSGEGFRNISLDVRAGEILGLAGVVGAGRTEFAE
TLFGLRPQTAGSVVFDGAELKKRSPRLCIDRGLVYLPEDRQQHGLFLEAPLFWNVSSYLV
HRLPFFLRPGAERKVFETFRSSMGIKCTGPGQEARGLSGGNQQKVLLAKCLSARPKVLIL
DEPTRGVDVAARNDIYDLIRKLAAEGVAIILISSDFDEIEQLADRVEVMAFGQSGGALTD
NISVDAIARLAFGASEARHA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcaagcggcgaccgggagggtcgcgcagctgacggatatctggaagtcctac
ggtgccgtcccggtgctgaagggcgtttcgctcgccttgcaggcaggggaggtgcatgcg
cttctcggcggcaacggtgcgggcaagtcgagcctcatgaagatcatgtcgggcgtcatt
gcggccaattccggcgcaatcgaaatcaacggccggccgctcactcaggcctcgcccgcc
catgcgcaggagcttggcctctatctggtgccgcaggaagcgcatatcctgcccaaccag
agcgttctggaaaacatctgcctcggcctttccgcctcgccacgggcgctgcgcccgcgc
gtcgcgcagctggtggcggagcttgcggtgtcgctcgatctcgatgcgcaggccgcagca
ctcgaaatcgccgagcggcagatcgtcgagatcctgcgcggcctcgtgcgcgatgcgcgc
gtgctcatcctcgacgaacccacctcggcgttgacacccttcgagacgaatgcgctgttc
cagcgggtgcgcaagttgcaggcccagggcgtcggcatcttcttcatctcgcacaagctg
cgggaaatccgcgaaatctgccgcacgatcagcgttctgcgcgacggcgtcatcgtgctg
tccggtccgctcgacagctacagcgacgccgagatcatcgatgcgatgagccgggtgcag
atcaccgaggcctccggcaaggaccgcaccggccgcaaggtctcgcagatcggccagccg
cgcctcagcgtgcgcggcctgagcggcgagggcttccgcaatatcagcctcgatgtccgg
gcgggcgagatcctcggccttgccggcgtcgtcggcgcgggccgcaccgaattcgccgaa
acgctgttcggcctgcgtccccagacggcgggcagcgtcgtcttcgacggcgcagagctg
aagaagcgctcaccgcgcctctgcatcgaccgcggcctcgtctacctgccggaggaccgc
cagcagcacggcctcttcctggaagcgccgctgttctggaatgtctcgtcctatctcgtg
catcgcctgccgttcttcctgcgcccgggcgccgagcgcaaggtcttcgaaacgttccgg
tcctccatgggcatcaagtgcaccggtcccggacaggaggcgcgtggcctttctggcggc
aaccagcagaaggttctgctggcgaagtgcctgtcggcccggccgaaggtgctgatcctc
gacgagccgacgcgcggcgtcgacgtggcggcgcgcaacgatatctacgatctcatccgc
aagcttgccgccgagggcgtcgccatcatcctcatctcctcggatttcgacgagatcgag
cagcttgccgaccgggtggaggtcatggcgttcggccagtccggcggggcgctcacggac
aatatctccgtcgacgccatcgcccggctcgccttcggcgcttcggaggcccgtcatgct
tga
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