Shinella sumterensis: Q9314_11290
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Entry
Q9314_11290 CDS
T09417
Name
(GenBank) autoinducer 2 import system permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_11290
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_11290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_11290
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
Q9314_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
MlaD
Motif
Other DBs
NCBI-ProteinID:
WLS06795
LinkDB
All DBs
Position
2237076..2238089
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AA seq
337 aa
AA seq
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MKKLIFRWETALLVMLVAELVIFGIINPRFLNVANLIYGTSDFVQIGIVALPLTLVIIAG
GIDVSFASVIGLAAIVFGVATFYGVPLPLSIALALVAGALCGLLNATVIHLSKIQPLVVT
LGSLYLFQGTATVASGLVGAGGYEGIGNFPDAFNAFGYAQVLGLPAPLALFLVLALMLIV
LLHFTRFGRAVFLSGQSESAARFAGIPVGRVQTITYVITGVSAAIAGLVMSAYFGSARVD
LGSATLLPAVTAAVLGGASIYGGQGSILGTLIATFVIGYLQQGLQATGVPSQISSALSGG
LLVVAVALRHGSAMLADFIAVARQQKKSRAAVTSGGE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgatcttccgctgggagaccgcgctcctcgtcatgctggtcgccgaactc
gtcatcttcggcatcatcaatccgcgcttcctcaatgtcgcgaacctgatctacggcacc
tcggatttcgtgcagatcggtatcgtcgccctgccgctcaccctggtcatcatcgccggc
ggcatcgatgtgtccttcgcctcggtgatcggccttgccgccatcgtcttcggcgtcgcc
accttctacggcgtgccgctgccgctctcgattgcgctggcgctcgtcgccggtgcgctg
tgcgggcttctcaatgccaccgtcatccatctgtcgaagatccagccgctcgtcgtgaca
ctcggcagcctctatctcttccagggcaccgcgacggtcgcgtcgggtcttgtcggcgcg
ggcggctacgagggcatcggcaacttcccggatgccttcaacgccttcggttatgcccag
gttctcggcctgccggcgccgctggcgctgttccttgtgctcgcgctgatgctgatcgtg
cttttgcacttcacgcgcttcggccgcgccgtcttcctgtccggccagtcggaaagtgcg
gcacgtttcgccggcatcccggtcgggcgcgtgcagaccatcacctatgtcatcaccggc
gtttcggccgccatcgccggtctcgtcatgtcggcctatttcggttcggcccgcgtggac
ctcggttcggcgacgcttctgcctgccgttacggccgccgtgcttggcggcgcctcgatc
tatggcggccaggggtccatcctcggcacgctgattgccaccttcgtcatcggctacctg
cagcagggcctgcaggccaccggtgtgcccagccagatttccagcgcactttcgggaggg
ttgctggttgtcgcggtcgcattgcgccacggaagcgccatgctggccgatttcatcgcc
gtcgcccggcaacagaaaaaatcccgggcggcagtcacttcaggaggagaatga
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