Shinella sumterensis: Q9314_11875
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Entry
Q9314_11875 CDS
T09417
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Q9314_11875 (ltrA)
Enzymes [BR:
ssum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
Q9314_11875 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
DUF676
Motif
Other DBs
NCBI-ProteinID:
WLS06903
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All DBs
Position
complement(2370797..2372323)
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AA seq
508 aa
AA seq
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MSDTVNTEFILDMQRKLYRWSAASPERRFADLFNIVCDRGTLLHAWQRLARNRGSNTPGT
DGVTRKAVEGRPDGVAGFLEEIRQDLRQGTYRPEPVRQRLIPKPGKPGKFRPLGIPTLKD
RLVQMALKLVLEPIFEADFYSTSYGFRPGRSTHDALAKVRHRLDPTKAGPSRTRFVIEGD
IKGCFDAIDHHVLMERVRRHIRDRKVLRLVLAFLKADIMIEGNRRHPVTGTPQGGIVSPL
LANVYLTAIDERYRRWIPNPRDKTPVRARQRLQTDYQRGRPGFYVVRYADDFVVLVQGTQ
KDAEDERLALAQFLKEELRMELSMEKTKITDVREGFDFLGYRVAQEKMPSTGRYVGMLFI
PKGKPQFLRDKIKARVRETPTGVTLAALVDNLNPVIVGWRNYYRYATRSGKEFGKLDWWL
YWRLKSWLGKKHGKASGRTLRRIYTVPGTGKDGGWQSGAKKLARFADTKRLRYPDRGLRI
PNGWDDPDERFLKGADKFWEATRALETL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacggtgaataccgagttcattctcgacatgcagcgcaagctgtatcggtgg
agtgccgcgtcccccgaaaggaggttcgcggatctgttcaatatcgtatgcgaccgcggc
acgctgcttcatgcctggcaacggctggcccgtaacaggggcagcaacacaccgggcacg
gacggcgtgacgcgtaaggcggtcgaagggcgtcccgatggggtcgcaggctttctggag
gaaatccggcaagacctgcggcagggaacttaccggcctgaacctgtccggcagaggttg
atcccgaagccgggcaaaccgggaaagttccgccccttaggcattcccacgctcaaagac
cgactagtccaaatggcgctcaaattggtgctggagccgatcttcgaggcggatttctat
tcgacctcatacggctttcgccccggtcggagcacccacgacgcactcgcaaaggtgcgt
cacagactggacccgacaaaggctggtccttcacggacccggtttgtaattgaaggggac
atcaaggggtgtttcgacgccatcgatcatcatgtgctgatggaacgggtgcgacgacac
attcgggaccggaaggtcctgcgactcgtcctcgctttcctgaaagccgacatcatgatc
gagggcaatcgtcggcatccggtaaccggaaccccgcaagggggcatcgtctcgccgctc
ttggccaatgtctacctgacggccatcgatgagcgataccggcgctggattcccaatcca
cgggataaaacaccggtgcgggcgcgacagcgcctacagaccgactaccaacgtggtcgt
ccggggttctacgtggtgcgatacgcggacgactttgtcgtcctcgtgcagggaactcag
aaggatgccgaagacgagcgtctggcgctggcgcagttcctgaaagaggaattgcgcatg
gagttatcgatggagaagaccaagatcaccgatgtccgggaaggctttgactttctcggc
taccgggttgcgcaggaaaagatgccatccacaggacggtatgtcggcatgctcttcatt
ccgaagggcaagccacagttcctccgcgacaagatcaaggcccgagtgcgggaaacgcca
actggcgtcacccttgccgcactagttgataacctcaacccggtcatcgtcggctggcga
aactactaccgatacgctacacgatcagggaaggagttcggcaagctcgactggtggctg
tactggcgcctgaaatcctggctcggcaagaaacacggcaaggcgtctggaaggacattg
cgtcgtatatataccgtgccgggaaccgggaaagacggcggttggcaatcgggcgcgaag
aaactcgcccggttcgccgacaccaaacgcctgcgatacccggaccgaggcctacgcata
ccgaacggatgggacgacccggatgagcgcttcctgaagggagctgacaaattctgggaa
gcaacccgcgccctcgaaacattatga
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