KEGG   Shinella sumterensis: Q9314_12520
Entry
Q9314_12520       CDS       T09417                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ssum  Shinella sumterensis
Pathway
ssum00300  Lysine biosynthesis
ssum00470  D-Amino acid metabolism
ssum01100  Metabolic pathways
ssum01110  Biosynthesis of secondary metabolites
ssum01120  Microbial metabolism in diverse environments
ssum01230  Biosynthesis of amino acids
Module
ssum_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ssum00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Q9314_12520 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Q9314_12520 (dapF)
Enzymes [BR:ssum01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Q9314_12520 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: WLS07021
LinkDB
Position
2501333..2502232
AA seq 299 aa
MTETVEFARMNGLGNMILVVDMRGRPDVVTPAAAIALNADPATRFDQIMAIHDPKVDGTD
AFIDILNCDGTRAQACGNGTRCVVQALAAETGKKAFTFQTVAGILNAVEHADGTISVDMG
KPVFEWDRIPLAEEFYDTSRIELQIGPIDAPVLHSPSVMSMGNPHAIFWVDRDPMSFDLD
RFGPLLENHPMFPEKANITLAQVTSPTTMTTRTWERGAGLTLACGSAACSAGVSGARTGR
TGRTVEITVASSPNRGKLTIEWREDDHVVMTGPAEWEWSGMLNPATGAFRRDDAEAAAL
NT seq 900 nt   +upstreamnt  +downstreamnt
atgacagaaacggtcgaattcgcaaggatgaacgggctgggaaacatgatcctggtcgtg
gacatgcgcgggcgtccggatgtcgtcacgccggcggcggcgatcgcgctcaatgccgat
cccgcgacccgcttcgaccagatcatggcgatccacgatccgaaggtcgacggcaccgat
gccttcatcgatatcctgaattgcgacggcacgcgggcgcaggcctgtggcaacggcaca
cgctgcgtggtgcaggcgctggccgccgagacgggcaagaaggccttcaccttccagacc
gtcgccggcatcctgaacgccgtcgaacacgcggacggcacgatttccgtcgacatgggc
aagccggtcttcgaatgggaccgcattccgctcgccgaggaattctacgatacgagccgg
atcgagctgcagatcgggccgatcgacgctcccgtgctgcattcgccctcggtcatgtcg
atgggcaatccgcatgcgatcttctgggtcgaccgcgatccgatgagcttcgatctcgac
cgtttcggcccgctgctcgaaaaccacccgatgtttccggaaaaggcgaatatcacgctg
gcgcaggtgacctcgccgaccacgatgacgacgcgcacctgggagcgcggcgcggggctg
acgctcgcctgcggctcggccgcctgctcggcgggcgtttcgggcgcgcgcaccggccgc
acgggccgcacggtggagatcaccgtcgccagcagcccgaaccgcggcaagctcaccatc
gaatggcgcgaagacgatcacgtcgtcatgaccggcccggccgaatgggagtggtcgggc
atgcttaatcccgcaaccggcgcgttccgccgggatgacgccgaggcggcggccctttga

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