Shinella sumterensis: Q9314_13495
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Entry
Q9314_13495 CDS
T09417
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00630
Glyoxylate and dicarboxylate metabolism
ssum00680
Methane metabolism
ssum01100
Metabolic pathways
ssum01120
Microbial metabolism in diverse environments
ssum01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Q9314_13495 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
Q9314_13495 (fdhF)
Enzymes [BR:
ssum01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Q9314_13495 (fdhF)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_21
Fer4_6
Fer4_10
Fer4_2
Fer4_9
Fer4_15
Fer4_16
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
WLS07201
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Position
complement(2685857..2688736)
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AA seq
959 aa
AA seq
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MPLVPEIDYGTPASRSEKMVTLTIDGNEITVPEGTSIMRASMEAGIQVPKLCATDMVDAF
GSCRLCLVEIEGRNGTPASCTTPVAPGLVVHTQTGRLKDIRKGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARNNGEANARWMPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFDSRVSPGMHEHFLESECVSCGACVQACPTATLTEKS
VIEIGQPEHSVVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
SHRERILNPMIREKISDPWREVTWEEAYTHVASEFRRIQYQYGRDSIGGITSSRCTNEET
FLVQKLIRAGFGNNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEHTDVVIVIGANP
TDAHPVFGSRLKKRLRKGAKLIVIDPRRTELVSSPHIKASYHLPLKPGTNVAVVTALAHV
IVTEGLCDEAFIRERCDWSEFEDWASFVAEPRHSPEETEAFTGVPAEALRGAARLFATGG
NGSIYYGLGVTEHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDIFEKLWGVKLNNEPGLRIPNMLDAAVEGTFKGIYIQGEDILQSDP
DTKHVSAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRRVMT
PKNGYADWEVTQNLAKAMGLDWTYTHPSEIMDEIAATTPSFALVSYDYLDKVGSVQWPCN
EKNPLGSPIMHTNGFVRGKGKFIRTEYVATDEKTGPRFPLLLTTGRILSQYNVGAQTRRT
DNVIWHEEDRLEIHPHDAENRGIREGDWVRLSSRAGDTTLRALITDRVAPGVVYTTFHHP
TTQANVITTDFSDWATNCPEYKVTAVQISPSNGPSDWQVEYDELARRSRRIKGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgttcccgaaatcgattacggcacccccgcctcccgctcggaaaagatggtg
acgctcaccatcgacggcaacgaaatcaccgtccccgagggcacgtccatcatgcgcgcc
tcgatggaggcaggcatccaggtacccaagctctgcgccaccgacatggtggatgccttc
ggctcctgccgcctctgtcttgtcgaaatcgaaggccgcaacggcacgccagcctcctgc
acgacgccggtcgcacccggcctcgtcgtccacacccagaccggtcgcctgaaggacatc
cgcaagggcgtgatggaactctatatctccgatcacccgctcgactgtctcacctgtgcg
gcgaacggcgactgcgagttgcaggacatggccggcgccgttggcctgcgcgacgttcgc
tacggctacgagggcgacaaccacgtcaaggcgcgcaacaatggcgaagcaaacgcccgc
tggatgccgaaggacgaatccaacccctatttcacctacgacccatccaagtgcatcgtc
tgctcgcgctgcgtgcgcgcctgcgaggaggtccagggcacctttgcgctgaccatcgaa
ggccgcggtttcgacagccgcgtttcgcccggcatgcacgagcatttcctcgaatccgaa
tgcgtgtcctgcggcgcctgcgtgcaggcctgcccgacggcgacgctgaccgaaaagtcg
gtgatcgagatcggccagccggagcattcggtggtcacgacctgcgcctattgcggcgtc
ggctgctccttcaaggcggaaatgcgcggcgaagaactggtgcgcatggtgccgtggaag
gacggacaggccaatcgcggccattcctgcgtcaagggccgcttcgcctatggctactcg
tcccaccgcgagcgcatcctcaacccgatgatccgcgagaagatctccgatccctggcgc
gaagtgacctgggaagaggcgtacacgcatgtcgcctccgagttccgccgcatccagtac
cagtacggccgtgattccatcggcggcatcacctcctcgcgctgcacgaacgaggaaacc
ttcctcgtccagaagctcatccgcgccggcttcggcaacaacaacgtcgatacctgcgcc
cgcgtctgccattcgcccacgggctacggcctcggccaggccttcggtacgtccgccggc
acccagaatttcgattcggttgagcacacggatgtcgtcatcgtcatcggcgcaaacccc
accgatgcccatccggtcttcggctcgcgcctcaaaaagcgcctgcgcaagggcgccaag
ctcatcgtcatcgatccgcgccgcacggaactcgtgtcgtcgccgcatatcaaggcatcc
taccacctgccgctgaaacccggcacgaacgttgccgtcgtcaccgcgctcgcccatgtc
atcgtgacggaaggcctctgcgacgaggcgttcatccgcgagcggtgcgactggtcggaa
ttcgaggactgggcgtccttcgtcgccgaaccgcgccacagccccgaggaaacggaagcc
ttcaccggcgttccggccgaagcgctgcgcggcgccgcccgcctcttcgccaccggtggc
aacggctcgatctattacggtctcggcgttaccgaacacagccagggctcgaccacggtc
atggccatcgccaacctcgccatggcgaccggcaatatcggccgtcccggcgtgggcgtg
aatccgctgcgcggccagaacaacgtgcagggctcgtgcgacatgggttcgttcccgcac
gaactgcccggctatcgccacatctccgacgacgcgacgcgtgatatcttcgaaaagctg
tggggcgtgaagctcaacaacgaaccgggcctgcgcattcccaacatgctggatgccgcc
gtcgagggcacgttcaagggcatctacattcagggcgaggatatcctccagtccgacccg
gacaccaagcacgtctctgccggactggctgcgatggaatgcgtcgtcgtgcaggacctg
ttcctcaacgagaccgccaactacgcccatgtcttcctgccgggctccaccttcctcgaa
aaggacggcaccttcaccaatgcggagcgccgcatcaaccgcgtgcgccgcgtcatgacg
ccgaagaatggctatgccgactgggaggtcacgcagaacctcgccaaggcgatgggcctc
gactggacctacacgcatccttccgagatcatggacgagatcgccgcaacgacaccgagc
ttcgcgctggtgtcctatgactatctcgacaaggtcggctccgtgcagtggccctgcaac
gaaaagaacccgctcggctcgccgatcatgcataccaacggcttcgtccgcggcaagggt
aagttcatccgcacggaatatgtcgccaccgatgaaaagaccggtccgcgcttcccgctg
ctgctcaccaccggccgcattctcagccagtacaatgtcggcgcccagacacggcgcacc
gacaacgtcatctggcatgaggaggaccggctggaaatccatccgcacgatgccgagaac
cgcggcatccgcgagggtgactgggtgcgactctccagccgcgccggcgacacgacgctt
cgcgcactcatcaccgatcgcgtcgcaccgggcgtcgtctacacgaccttccaccacccg
acgacgcaggcaaacgtcatcaccaccgatttctcggactgggcgacgaactgtcccgag
tataaggtgacggccgtgcagatctcgccgtcgaacggaccgtccgactggcaggtcgaa
tatgacgagctcgcccgccggtcgcgccgcatcaagggcaagctggaggcagcggaatag
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