Shinella sumterensis: Q9314_13590
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Entry
Q9314_13590 CDS
T09417
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssum03110
]
Q9314_13590 (clpB)
Chaperones and folding catalysts [BR:
ssum03110
]
Heat shock proteins
HSP100
Q9314_13590 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
nSTAND3
AAA_16
IstB_IS21
AAA_18
TniB
Sigma54_activat
AAA_7
AAA_25
AAA_28
AAA_14
AAA_3
ABC_tran
AAA_24
NACHT
DNA_pol3_delta2
T2SSE
NBD_SMAX1
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
WLS07220
LinkDB
All DBs
Position
2709628..2712234
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AA seq
868 aa
AA seq
DB search
MNIEKYSERVRGFLQSAQTKALADGNPQFTPEHVLKVLLDDEQGMATSLIERAGGNARDA
RIANDAALAKLPKVSGGNGQVYLSQPLAKVFTTAEDAASKAGDSFVTVERLLLALAIEKS
AATSDILAKAGVTAAKLNQVINDIRKGRTADTASAEQGFDSLKKFARDLTADAREGRLDP
VIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLMA
LDMGALIAGAKYRGEFEERLKAVLAEVQAEDGEIILFIDEMHTLVGAGKADGAMDASNLL
KPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVDEPTVEDTISILRGLKEKYEQ
HHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRI
IQLKIEREALKKETDRASQDRLEKLEVDLAAIEEEASALTARWQAEKSKLGRAADLKRQL
DELRNELAISQRKGEFQRAGELAYGIIPKLEKELEEAEGSDAGDVDPMVQEVVTADNIAH
VVSRWTGIPVDKMLEGERDKLLRMEDDLAKWVVGQGDAVQAVSRAVRRARAGLQDPNRPI
GSFIFLGPTGVGKTELTKALARFLFDDETAIQRMDMSEYMEKHSVARLIGAPPGYVGYEE
GGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTMIIMTS
NLGAEYLTALGENEDSDTVRDQVMDVVKTAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQ
LARLRRLLEDRKIVLELDEEAVHWLAEKGYDPVYGARPLKRAIQKHLQDPLAEKILAGDI
PDGSIVKVTAGSDRLLFAPRGAAVSKAA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgagaaatactccgaacgcgttcgcggtttcctgcaatccgcccagaccaag
gcgcttgccgacggaaatccgcagttcactccggaacatgtactgaaagtgctgctcgac
gacgagcagggcatggcgacctcgctcatcgagcgggccggtggcaatgcgcgcgatgcg
cggatcgccaacgatgccgcccttgccaagctgccgaaggtttccggcggcaacgggcag
gtctacctgtcgcagccgctggccaaagtcttcaccacggccgaggatgccgccagcaag
gccggcgacagcttcgtcaccgtcgagcgcctgctgctggcgctggccatcgaaaaatcc
gccgcgacgtccgatattctggcgaaggccggtgtgacggccgcgaagctcaaccaggtc
atcaacgacatccgcaagggccgcaccgccgatacggcgagcgccgagcagggtttcgat
tcgttgaagaagttcgcccgcgacctgactgccgatgcgcgcgaaggccgtctcgatccc
gtcatcggccgcgacgacgagatccgccgcacgatccaggtcctgtcgcgccgcaccaag
aacaacccggttctcatcggtgagcccggcgtgggcaagaccgcgatcgccgaaggcctt
gcgctgcgcatcgtcaacggcgatgtgccggaaagcctcaaggacaagaagctgatggcg
ctcgacatgggcgcgctgatcgccggtgcgaaataccgcggtgaattcgaggagcgcctg
aaggccgttcttgccgaagtgcaggcggaagacggcgagatcatcctgttcatcgacgaa
atgcacacgctggtcggcgccggcaaggcggatggcgccatggacgcatccaacctgctc
aagcccgcgcttgcccgtggcgagctgcactgcgtcggcgccaccacgctcgacgagtat
cgcaagcatgtcgagaaggacgcggcccttgcccgccgattccagcccgtcatggtggac
gagccgaccgtcgaggacacgatctcgatcctgcgcggcctgaaggagaagtacgagcag
caccacaaggtccggatctccgattcggctctcgttgccgctgccacgctttccaaccgc
tacatcacggatcgtttcctgccggacaaggccatcgacctcatggacgaagccgcctcg
cggctgcgcatgcaggtggattccaagccggaagaactcgacgagctcgaccgccgcatc
attcagctcaagatcgagcgcgaggccctgaagaaggaaaccgaccgcgcatcgcaggat
cggctcgaaaagcttgaagtcgaccttgcggcgatcgaggaggaagcctccgcgctgacg
gcgcgctggcaggcggaaaagtcaaagctcggccgtgccgccgacttgaagcgtcagctc
gacgagttgcgcaacgaactcgccatttcgcagagaaagggtgagttccagcgtgcgggc
gaactcgcctacggcattattcccaagctcgaaaaggagctggaggaagccgaaggcagc
gatgccggcgatgtcgatccgatggtgcaggaggtcgtgaccgccgacaacatcgcgcat
gtggtttcccgctggacgggcatccccgtggacaagatgctggaaggcgaacgcgacaag
ctgctgcggatggaagacgatctcgccaaatgggtcgtcggccagggcgatgccgtccag
gcggtctcgcgcgccgtgcgccgcgcccgcgccggcttgcaggatccgaaccggccgatc
ggctcgttcatcttcctcggcccgaccggcgtcggcaagacggagttgaccaaggcgctt
gcgcgcttcctcttcgacgacgagacggcgatccagcgcatggacatgtcggaatacatg
gagaagcactccgtggcccggctgatcggtgcgcctcccggctatgtcggttatgaggaa
ggtggtgcgctcaccgaatccgtccgccgccggccctaccaggtcgtgctgttcgacgag
atcgagaaggcgcatcccgacgtcttcaacgtgctgctgcaggttctcgacgatggtcgc
ctgaccgatggccagggccgcaccgtggacttccgcaacacgatgatcatcatgacctcg
aacctcggcgccgaatacctgacggcgcttggcgagaacgaggacagcgacacggttcgc
gaccaggtgatggatgtcgtgaagacggcattccgcccggaattcctgaaccgcgtcgac
gagatcatcctgttccaccgcctgcggcgttcggaaatgggtgcgatcgtcgatatccag
ctggcccgcctgcgccggcttctggaagatcgcaagatcgttctcgagctggacgaggag
gccgtgcactggctggcagagaagggctacgatccggtctatggcgcacgtccgctgaag
cgtgcgatccagaagcaccttcaggatccgctcgccgagaaaatcctggcgggcgacatc
ccggacggatcgatcgtcaaggtcacggccggctccgatcgcctgctgtttgcgccgcgc
ggggcggcggtcagcaaggcggcctga
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