Shinella sumterensis: Q9314_13915
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Entry
Q9314_13915 CDS
T09417
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00500
Starch and sucrose metabolism
ssum01100
Metabolic pathways
ssum01110
Biosynthesis of secondary metabolites
Module
ssum_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Q9314_13915 (glgX)
Enzymes [BR:
ssum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Q9314_13915 (glgX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
WLS07272
LinkDB
All DBs
Position
2776392..2778473
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AA seq
693 aa
AA seq
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MSYSFSELDFMKPELGAAFTGEGTHFAVFSAHAEQVELCLFSDDGKEETARLALPKREGD
VWSGYIAGLRPGTVYGYRAHGPYDPKAGHRFNPNKLLLDPYAQQVMGELQWDDALYGYKV
GDPQEDLSFDDRDSAPFMVKGVVQELEFDWAGDSAIRRPWTETIIYETHVRGLTMTHPGV
PDELRGTFLGMASDPVIEHLVDLGISAIELLPIQYFPDDRFLLEKGLRNYWGYQTLGFFA
PQPRFLSAGAVTEFKTMVKRFHAAGIEVIMDVVYNHTAEGSERGPTLSFRGLDNLSYYRL
SPDDPRHSYDTTGTGNTVNIAHPMVLRMVLDSLRYWVGVMHVDGFRFDLASTLGRTRHIE
FDREGTFFDAIRQDPILSGVKLIAEPWDVGDGGYQVGGFPHPFREWNDKYRDDVRRFWKG
DGGLVPGVAARLTGSAQQFNHSDRGATSSVNLLSAHDGFTLMDTVSYDNKHNDANGEENR
DGHSDNHSHNMGAEGPTDDQGIRDARDRRRRNMIATLMLSQGVPMLLGGDELGNSQGGNN
NAYCQDNEIGWTDWSGVDDPFLAFCKGAIAFRKAHPALRQERFLTGEPAEDGTVEIGWYR
PDGAAMDDATWQDGELRTLGLFLCKSVDDERSDQLFLVFNAGGDCEVTLPDVNGIQAWKR
VLDTGAAEEGFAEHPAESPAMVYGASVVAFEPA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagttattcgttttccgagctcgatttcatgaaaccggagctcggggccgcctttacg
ggcgagggcacgcattttgcggtcttctccgcccatgcggaacaggtcgagctttgcctt
ttcagcgatgatggaaaagaggagaccgcgcgtctggcgctgccgaagcgtgagggcgat
gtgtggtccggttacatcgcgggactacggcccggcacggtctacggctaccgggcccac
gggccctacgatccgaaggccgggcaccgtttcaaccccaacaagctgctgctcgatccc
tatgcccagcaggtgatgggagaactccagtgggacgatgcgctctacggctacaaggtc
ggcgatccccaggaggatctgtccttcgatgatcgcgacagcgcgcccttcatggtcaag
ggcgtggtgcaggaactggaattcgactgggccggagattccgccattcgccggccatgg
accgagaccatcatctacgaaacgcatgtgcgcgggctgacgatgacccatccgggtgtc
ccggacgagctgcgcggcaccttcctcggcatggcgagcgatcccgttatcgaacatctc
gtcgacctcggcatttccgcaatcgaactgctgccgatccagtatttccccgatgaccgg
ttcctcctggaaaaaggcctgcgcaattactggggctaccagacgctcgggttcttcgcc
ccgcagccacgcttcctttcggcgggcgccgtcaccgaattcaagaccatggtgaaacgc
ttccatgcggccggcatcgaggtgatcatggatgtggtctataaccacaccgccgagggt
tccgagcggggcccgaccctgagcttccgcggcctcgacaatctcagctactatcgcctt
tcgcccgacgatccgcgtcactcctacgatacgacgggcacgggcaatacggtcaacatc
gcgcatcccatggtgctgcgcatggtgctggacagcctgcgttactgggttggcgtgatg
catgtcgacggtttccggttcgacctcgccagcacgctcggccgtacacggcacatcgaa
ttcgaccgcgaagggaccttcttcgacgcaatccggcaggaccccatcctgtcaggcgtg
aaactgatcgcggaaccctgggatgtcggtgacggcggctatcaggtcggcggctttccc
catccattccgcgaatggaacgacaagtaccgcgacgacgtccgccgcttctggaagggc
gacggcgggcttgtgccaggcgtcgccgcacgccttaccggctctgcgcagcagttcaat
cattcagaccgcggcgcaacgtcgtcggtcaatcttctcagcgcccatgacggtttcacc
ctcatggacacggtttcctacgacaacaagcacaatgatgccaatggcgaggaaaaccgc
gacggccattccgacaatcactcgcacaatatgggcgcggaaggcccgacggacgatcag
ggtatccgggacgcacgcgatcgccgccggcgcaacatgatcgcgacgctgatgctaagc
cagggcgtgccgatgctgcttggcggcgatgaactcggcaacagccagggcggcaacaac
aacgcctattgccaggacaacgaaatcggctggaccgactggagcggcgtggacgatccg
ttcctggcattctgcaagggtgcgatcgccttccgcaaggctcaccccgcccttcgacag
gagcggttcctgacgggcgaacccgccgaggacggtacagtggagatcggctggtaccgt
ccggacggggcggccatggacgacgccacgtggcaggatggcgagttgcgcacgctcggg
ctcttcctgtgcaagtctgtcgacgatgagcgttccgaccagctcttcctggtcttcaac
gcgggtggagactgcgaggtcacgctgccggacgtgaacgggattcaggcgtggaagcgt
gtgctggacaccggcgcggcggaggaaggctttgctgagcatcccgccgaaagccccgcc
atggtctatggcgccagcgtcgtcgccttcgaaccggcctga
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