Shinella sumterensis: Q9314_13990
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Entry
Q9314_13990 CDS
T09417
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00730
Thiamine metabolism
ssum01100
Metabolic pathways
ssum01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Q9314_13990 (thiC)
Enzymes [BR:
ssum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Q9314_13990 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WLS07286
LinkDB
All DBs
Position
complement(2787836..2789659)
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AA seq
607 aa
AA seq
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MNIAAQKLTPTVTTGALPASRKIHIAGEQHPEIRVPMREISLHPTSGEPPVIVYDASGAY
TDPDHIVAIESGLPRLRESWIAARGDTEDYDGRHIRPEDNGFATGERLTPEFPVRNRPRR
AKDGKAVTQLAYARAGIITPEMEFIAIRENLGRKAAKDALVRDGDSFGAHIPDFVTPEFV
RQEVASGRAIIPANINHPEAEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAIRWG
ADTVMDLSTGRNIHNIREWIVRNSPVPIGTVPLYQALEKVNGIAEDLTWEVFRDTLIEQA
EQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHRESFLYEHFEEICEIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTQIAWARDCQVMIEGPGHVPMHKI
KENMDKQLKTCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKVGVITYKIAAHAADLAKGHPAAKIRDDALSRARFEFRWEDQFNLSLDPETAR
SYHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLEAMAAKFREGGDLYMPL
GTTPAGE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgccgcccagaagcttaccccgaccgtcacgaccggcgccctgcccgcctcg
cgcaagatccacattgccggcgaacagcatcccgaaatccgcgtgccgatgcgcgagatt
tccctccacccgacctccggtgaaccgcccgtcatcgtctacgacgcctcgggcgcctat
accgaccccgaccacatcgtcgccatcgaaagcggcctgccgcggctgcgcgaaagctgg
atcgccgcacgtggcgataccgaagactatgacggccgccacatccgcccggaagacaac
ggttttgccaccggcgagcgactgaccccggaatttccggtccgcaaccgcccgcgccgg
gcgaaggatggcaaggccgtgacccagcttgcctatgcccgcgccggcatcatcacgccg
gagatggaattcatcgccatcagggaaaatctcggccgcaaggccgcgaaggatgcgctc
gtccgcgacggtgacagtttcggcgcccatattcccgatttcgtcacgccggaattcgtc
cgccaggaggtcgccagcggccgggcgatcattcccgccaacatcaaccacccggaagcc
gagccgatgatcatcggccgcaatttcctggtcaagatcaacgccaatatcggcaattcg
gccgttacctcctccatggccgaagaggtcgagaagatggtctgggcgatccgctggggc
gccgatacggtcatggacctgtcgaccggccgcaacatccacaacatccgcgaatggatc
gtccgcaactcgccggttccgatcggcaccgtgccgctctatcaggcgctcgagaaggtg
aacggcatcgccgaggacctgacctgggaagtcttccgcgacacgctgatcgagcaggcc
gaacagggcgtcgactatttcaccatccacgccggcgtgcggctgcattacatcccgctc
accgtcaaccgcgtcaccggcatcgtctcgcgcggcggctcgatcatggccaagtggtgt
cttcatcaccatcgcgagagcttcctctacgagcatttcgaggaaatctgcgagatctgc
cgcgcctatgacgtctccttctcgctgggcgacggcctgcgccccggctcgattgccgat
gccaacgatgccgcgcagttcgccgaactcgaaacgcttggcgaactcacgcagatcgcc
tgggccagggattgccaggtcatgatcgaaggtcccggccatgtgccgatgcacaagatc
aaggagaacatggacaagcagctgaagacctgcggcgaggcgccgttctacacgctcggc
ccgctcaccaccgatatcgcgcccggctacgaccacatcacgtccggtatcggcgcggcg
atgatcggctggttcggcacggccatgctctgctacgtcacgccgaaggaacatctcggc
ctgcccgaccgcaacgacgtcaaggtgggtgtcatcacctacaagatcgccgcccatgct
gccgatctcgccaaggggcatccggcggcgaagatccgcgacgacgcgctgtcgcgcgcc
cgcttcgaattccgctgggaagaccagttcaacctgtcgctcgatccggaaacggcccgc
tcctaccacgacgagacgctgcccaaggaggcgcacaaggtggcgcatttctgctccatg
tgcggtccgaaattctgctccatgcgcatctcccatgacatccgtgccgaagcgcagaag
gagggactggaggcgatggcagcgaagttccgcgagggcggcgacctctacatgccgctt
ggcacgacacctgcgggagaatga
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