Shinella sumterensis: Q9314_14350
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Entry
Q9314_14350 CDS
T09417
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
ssum02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_14350
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Q9314_14350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_14350
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Q9314_14350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Bmp
Peripla_BP_3
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
WLS07355
LinkDB
All DBs
Position
2869431..2870384
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AA seq
317 aa
AA seq
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MRKKLLGLTVAAVAAFAGFAHAQEEKKVTIGVSIPAASHGWTAGVIYHAERVAKQLMASH
PGLNVVVKTSPDPASQANAVQDLATQGIDALVILPTDPDPLVNAIKEIKGNGTFVALVDR
APSVNDGTVRDLYVAGNNFALGEVAGQYIKETTPEAEVVVIRGMPIPIDQERQNGFDKGI
EGSGVKVLDRQYGNWNRDDAFKVMQDYLTKYQKIDVVWCQDDDMAVGVLQAIEQAGRTDI
QYVVAGAGSKDMIKKVMDGDKMIPVDVLYPPAMVGTALEMAAAHFYGQVPVRGVYTIDAT
LVTKDNAKDFYFPDSPF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagaaactattgggcctgacggtcgccgcggttgccgcctttgccggcttcgcc
cacgcccaggaagagaagaaggtcacgatcggcgtctcgatcccggccgccagccacggc
tggacggcaggcgtgatctatcatgccgagcgtgtcgccaagcagctcatggccagccat
ccgggcctcaacgtcgtggtcaagacctcgccggatccggcaagccaggcgaatgccgtg
caggatcttgccacgcagggcatcgacgcgctcgtcatcttgccgaccgatccggatccg
ctggtcaacgccatcaaggaaatcaagggcaacggcaccttcgtcgcgcttgtcgaccgc
gcgccgagcgtcaacgacggcaccgtgcgcgatctctatgtcgccggcaacaacttcgcg
ctcggtgaagtggccggtcagtacatcaaggagaccacgccggaagccgaagtcgtcgtc
atccgcggcatgccgatcccgatcgaccaggagcgccagaacggcttcgacaagggcatc
gaaggctcgggcgtcaaggttctcgaccgtcagtacggtaactggaaccgcgacgatgcc
ttcaaggtcatgcaggactacctgaccaagtaccagaagatcgacgtcgtgtggtgccag
gacgacgacatggccgtcggcgttctccaggccatcgagcaggccggccgcacggacatc
cagtatgtcgtcgcgggcgccggttcgaaggacatgatcaagaaggtcatggacggcgac
aagatgatccccgtcgatgttctctatccgccggcaatggtcggtaccgcccttgagatg
gcggctgcccacttctacggccaggttccggtccgcggcgtctacacgatcgacgcgact
ctcgtcacgaaggacaacgcgaaggacttctatttcccggattcgccgttctga
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